Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
SHANK2Q9UPX8 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SHANK2Q9UPX8 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
SHANK2Q9UPX8 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC31.03■■■□□ 2.56
SHANK2Q9UPX8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC31.03■■■□□ 2.56
SHANK2Q9UPX8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SHANK2Q9UPX8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SHANK2Q9UPX8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC31.01■■■□□ 2.56
SHANK2Q9UPX8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC31.01■■■□□ 2.56
SHANK2Q9UPX8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
SHANK2Q9UPX8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC31.01■■■□□ 2.56
SHANK2Q9UPX8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC31.01■■■□□ 2.56
SHANK2Q9UPX8 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
SHANK2Q9UPX8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
SHANK2Q9UPX8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC31.01■■■□□ 2.55
SHANK2Q9UPX8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
SHANK2Q9UPX8 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC31.01■■■□□ 2.55
SHANK2Q9UPX8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC31.01■■■□□ 2.55
SHANK2Q9UPX8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
SHANK2Q9UPX8 FAM210CP-201ENST00000445714 574 ntBASIC31.01■■■□□ 2.55
SHANK2Q9UPX8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SHANK2Q9UPX8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC31■■■□□ 2.55
SHANK2Q9UPX8 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC31■■■□□ 2.55
SHANK2Q9UPX8 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC31■■■□□ 2.55
SHANK2Q9UPX8 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SHANK2Q9UPX8 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC31■■■□□ 2.55
SHANK2Q9UPX8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC31■■■□□ 2.55
SHANK2Q9UPX8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC31■■■□□ 2.55
SHANK2Q9UPX8 AC010331.1-201ENST00000611423 582 ntBASIC31■■■□□ 2.55
SHANK2Q9UPX8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 OR2A1-AS1-207ENST00000486094 819 ntBASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 AC008550.1-201ENST00000511500 884 ntBASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SHANK2Q9UPX8 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
SHANK2Q9UPX8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC30.98■■■□□ 2.55
SHANK2Q9UPX8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC30.98■■■□□ 2.55
SHANK2Q9UPX8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
SHANK2Q9UPX8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC30.98■■■□□ 2.55
SHANK2Q9UPX8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC30.98■■■□□ 2.55
SHANK2Q9UPX8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC30.98■■■□□ 2.55
SHANK2Q9UPX8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC30.98■■■□□ 2.55
SHANK2Q9UPX8 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
SHANK2Q9UPX8 ECEL1P3-201ENST00000427961 737 ntBASIC30.97■■■□□ 2.55
SHANK2Q9UPX8 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC30.97■■■□□ 2.55
SHANK2Q9UPX8 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
SHANK2Q9UPX8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SHANK2Q9UPX8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC30.97■■■□□ 2.55
SHANK2Q9UPX8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC30.97■■■□□ 2.55
SHANK2Q9UPX8 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
SHANK2Q9UPX8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC30.96■■■□□ 2.55
SHANK2Q9UPX8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC30.96■■■□□ 2.55
SHANK2Q9UPX8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC30.96■■■□□ 2.55
SHANK2Q9UPX8 MAX-217ENST00000557277 728 ntTSL 3 BASIC30.96■■■□□ 2.55
SHANK2Q9UPX8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC30.96■■■□□ 2.55
SHANK2Q9UPX8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC30.96■■■□□ 2.55
SHANK2Q9UPX8 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
SHANK2Q9UPX8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC30.95■■■□□ 2.55
SHANK2Q9UPX8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
SHANK2Q9UPX8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC30.95■■■□□ 2.55
SHANK2Q9UPX8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC30.95■■■□□ 2.55
SHANK2Q9UPX8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SHANK2Q9UPX8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC30.95■■■□□ 2.54
SHANK2Q9UPX8 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
SHANK2Q9UPX8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 POM121L13P-201ENST00000422362 380 ntBASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 ME2-206ENST00000638410 2289 ntTSL 5 BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 ME2-210ENST00000639255 2262 ntTSL 5 BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC30.94■■■□□ 2.54
SHANK2Q9UPX8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
SHANK2Q9UPX8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC30.93■■■□□ 2.54
SHANK2Q9UPX8 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
SHANK2Q9UPX8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC30.93■■■□□ 2.54
SHANK2Q9UPX8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC30.93■■■□□ 2.54
SHANK2Q9UPX8 PGM5P4-201ENST00000421970 445 ntBASIC30.93■■■□□ 2.54
SHANK2Q9UPX8 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC30.93■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms