Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
EBF1Q9UH73 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
EBF1Q9UH73 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
EBF1Q9UH73 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EBF1Q9UH73 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.07■□□□□ 0.96
EBF1Q9UH73 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
EBF1Q9UH73 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
EBF1Q9UH73 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.07■□□□□ 0.96
EBF1Q9UH73 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EBF1Q9UH73 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EBF1Q9UH73 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.07■□□□□ 0.96
EBF1Q9UH73 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.07■□□□□ 0.96
EBF1Q9UH73 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.07■□□□□ 0.96
EBF1Q9UH73 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.07■□□□□ 0.96
EBF1Q9UH73 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.07■□□□□ 0.96
EBF1Q9UH73 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EBF1Q9UH73 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.07■□□□□ 0.96
EBF1Q9UH73 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
EBF1Q9UH73 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.06■□□□□ 0.96
EBF1Q9UH73 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EBF1Q9UH73 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
EBF1Q9UH73 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EBF1Q9UH73 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
EBF1Q9UH73 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC21.06■□□□□ 0.96
EBF1Q9UH73 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EBF1Q9UH73 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.06■□□□□ 0.96
EBF1Q9UH73 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.06■□□□□ 0.96
EBF1Q9UH73 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.06■□□□□ 0.96
EBF1Q9UH73 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.06■□□□□ 0.96
EBF1Q9UH73 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
EBF1Q9UH73 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EBF1Q9UH73 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
EBF1Q9UH73 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EBF1Q9UH73 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EBF1Q9UH73 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.05■□□□□ 0.96
EBF1Q9UH73 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
EBF1Q9UH73 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.05■□□□□ 0.96
EBF1Q9UH73 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
EBF1Q9UH73 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.05■□□□□ 0.96
EBF1Q9UH73 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EBF1Q9UH73 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
EBF1Q9UH73 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.05■□□□□ 0.96
EBF1Q9UH73 UBE2SP1-201ENST00000450587 669 ntBASIC21.05■□□□□ 0.96
EBF1Q9UH73 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EBF1Q9UH73 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
EBF1Q9UH73 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EBF1Q9UH73 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EBF1Q9UH73 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.05■□□□□ 0.96
EBF1Q9UH73 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EBF1Q9UH73 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
EBF1Q9UH73 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
EBF1Q9UH73 AC092053.2-201ENST00000640557 1818 ntBASIC21.04■□□□□ 0.96
EBF1Q9UH73 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
EBF1Q9UH73 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
EBF1Q9UH73 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
EBF1Q9UH73 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.04■□□□□ 0.96
EBF1Q9UH73 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.04■□□□□ 0.96
EBF1Q9UH73 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EBF1Q9UH73 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.04■□□□□ 0.96
EBF1Q9UH73 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.04■□□□□ 0.96
EBF1Q9UH73 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.04■□□□□ 0.96
EBF1Q9UH73 AC008550.1-201ENST00000511500 884 ntBASIC21.04■□□□□ 0.96
EBF1Q9UH73 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.04■□□□□ 0.96
EBF1Q9UH73 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.04■□□□□ 0.96
EBF1Q9UH73 HLA-B-256ENST00000639848 1089 ntBASIC21.04■□□□□ 0.96
EBF1Q9UH73 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.04■□□□□ 0.96
EBF1Q9UH73 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EBF1Q9UH73 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EBF1Q9UH73 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EBF1Q9UH73 ECEL1P1-201ENST00000373592 1742 ntBASIC21.04■□□□□ 0.96
EBF1Q9UH73 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EBF1Q9UH73 KRT17P1-201ENST00000399211 1546 ntBASIC21.04■□□□□ 0.96
EBF1Q9UH73 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
EBF1Q9UH73 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EBF1Q9UH73 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EBF1Q9UH73 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EBF1Q9UH73 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EBF1Q9UH73 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
EBF1Q9UH73 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EBF1Q9UH73 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
EBF1Q9UH73 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EBF1Q9UH73 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.03■□□□□ 0.96
EBF1Q9UH73 AC091799.1-201ENST00000422823 811 ntBASIC21.03■□□□□ 0.96
EBF1Q9UH73 AC060766.5-201ENST00000590539 871 ntBASIC21.03■□□□□ 0.96
EBF1Q9UH73 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EBF1Q9UH73 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EBF1Q9UH73 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EBF1Q9UH73 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EBF1Q9UH73 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EBF1Q9UH73 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.02■□□□□ 0.96
EBF1Q9UH73 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
EBF1Q9UH73 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EBF1Q9UH73 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EBF1Q9UH73 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EBF1Q9UH73 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EBF1Q9UH73 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.02■□□□□ 0.96
EBF1Q9UH73 AC008403.3-201ENST00000598924 454 ntBASIC21.02■□□□□ 0.96
EBF1Q9UH73 CYP2T3P-201ENST00000601990 817 ntBASIC21.02■□□□□ 0.96
EBF1Q9UH73 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.02■□□□□ 0.96
EBF1Q9UH73 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms