Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA9Q9UGM1 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CHRNA9Q9UGM1 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA9Q9UGM1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHRNA9Q9UGM1 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.85■□□□□ 0.61
CHRNA9Q9UGM1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.85■□□□□ 0.61
CHRNA9Q9UGM1 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CHRNA9Q9UGM1 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.85■□□□□ 0.61
CHRNA9Q9UGM1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNA9Q9UGM1 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CHRNA9Q9UGM1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.85■□□□□ 0.61
CHRNA9Q9UGM1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 AC245052.3-201ENST00000450182 901 ntBASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 AC137761.2-201ENST00000561729 223 ntBASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 SLC7A5P1-201ENST00000568957 537 ntBASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 AC145350.3-201ENST00000569033 163 ntBASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 UBE2DNL-204ENST00000602536 740 ntBASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 SLC25A24-204ENST00000569674 2357 ntBASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 FEM1AP1-201ENST00000431297 1995 ntBASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHRNA9Q9UGM1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNA9Q9UGM1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNA9Q9UGM1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNA9Q9UGM1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHRNA9Q9UGM1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CHRNA9Q9UGM1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.83■□□□□ 0.6
CHRNA9Q9UGM1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA9Q9UGM1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.83■□□□□ 0.6
CHRNA9Q9UGM1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CHRNA9Q9UGM1 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.83■□□□□ 0.6
CHRNA9Q9UGM1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA9Q9UGM1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA9Q9UGM1 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA9Q9UGM1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHRNA9Q9UGM1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 KRT18P11-201ENST00000435214 1283 ntBASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 PLK5-205ENST00000642079 1969 ntBASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 AC006128.1-201ENST00000624704 1661 ntBASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHRNA9Q9UGM1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 LINC01006-201ENST00000333319 2292 ntBASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 MYCNOS-205ENST00000641950 531 ntBASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHRNA9Q9UGM1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms