Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 AC087623.3-201ENST00000607047 1098 ntBASIC16.72■□□□□ 0.27
GAR1Q9NY12 AC233992.3-201ENST00000607491 485 ntBASIC16.72■□□□□ 0.27
GAR1Q9NY12 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
GAR1Q9NY12 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAR1Q9NY12 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAR1Q9NY12 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC16.72■□□□□ 0.27
GAR1Q9NY12 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAR1Q9NY12 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
GAR1Q9NY12 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
GAR1Q9NY12 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAR1Q9NY12 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAR1Q9NY12 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAR1Q9NY12 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAR1Q9NY12 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC16.71■□□□□ 0.27
GAR1Q9NY12 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
GAR1Q9NY12 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GAR1Q9NY12 GLI3-203ENST00000437480 451 ntTSL 2 BASIC16.71■□□□□ 0.27
GAR1Q9NY12 AC105265.2-201ENST00000467189 838 ntBASIC16.71■□□□□ 0.27
GAR1Q9NY12 SUDS3P1-201ENST00000505831 966 ntBASIC16.71■□□□□ 0.27
GAR1Q9NY12 AC090192.1-201ENST00000517740 490 ntBASIC16.71■□□□□ 0.27
GAR1Q9NY12 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.71■□□□□ 0.27
GAR1Q9NY12 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GAR1Q9NY12 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.71■□□□□ 0.27
GAR1Q9NY12 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
GAR1Q9NY12 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAR1Q9NY12 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAR1Q9NY12 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAR1Q9NY12 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
GAR1Q9NY12 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
GAR1Q9NY12 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.71■□□□□ 0.27
GAR1Q9NY12 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.71■□□□□ 0.27
GAR1Q9NY12 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
GAR1Q9NY12 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
GAR1Q9NY12 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
GAR1Q9NY12 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
GAR1Q9NY12 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAR1Q9NY12 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC16.7■□□□□ 0.26
GAR1Q9NY12 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.7■□□□□ 0.26
GAR1Q9NY12 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
GAR1Q9NY12 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAR1Q9NY12 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.7■□□□□ 0.26
GAR1Q9NY12 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.7■□□□□ 0.26
GAR1Q9NY12 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
GAR1Q9NY12 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GAR1Q9NY12 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC16.7■□□□□ 0.26
GAR1Q9NY12 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.7■□□□□ 0.26
GAR1Q9NY12 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAR1Q9NY12 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAR1Q9NY12 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC16.7■□□□□ 0.26
GAR1Q9NY12 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
GAR1Q9NY12 MIR4767-201ENST00000582827 78 ntBASIC16.7■□□□□ 0.26
GAR1Q9NY12 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
GAR1Q9NY12 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAR1Q9NY12 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAR1Q9NY12 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
GAR1Q9NY12 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.7■□□□□ 0.26
GAR1Q9NY12 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAR1Q9NY12 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
GAR1Q9NY12 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.69■□□□□ 0.26
GAR1Q9NY12 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAR1Q9NY12 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAR1Q9NY12 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAR1Q9NY12 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GAR1Q9NY12 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.69■□□□□ 0.26
GAR1Q9NY12 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.69■□□□□ 0.26
GAR1Q9NY12 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.69■□□□□ 0.26
GAR1Q9NY12 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC16.69■□□□□ 0.26
GAR1Q9NY12 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.69■□□□□ 0.26
GAR1Q9NY12 AC126544.1-201ENST00000580842 1059 ntBASIC16.69■□□□□ 0.26
GAR1Q9NY12 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAR1Q9NY12 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAR1Q9NY12 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
GAR1Q9NY12 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
GAR1Q9NY12 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAR1Q9NY12 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAR1Q9NY12 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.69■□□□□ 0.26
GAR1Q9NY12 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
GAR1Q9NY12 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
GAR1Q9NY12 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.68■□□□□ 0.26
GAR1Q9NY12 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.68■□□□□ 0.26
GAR1Q9NY12 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAR1Q9NY12 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAR1Q9NY12 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GAR1Q9NY12 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAR1Q9NY12 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.68■□□□□ 0.26
GAR1Q9NY12 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAR1Q9NY12 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAR1Q9NY12 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.68■□□□□ 0.26
GAR1Q9NY12 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAR1Q9NY12 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.68■□□□□ 0.26
GAR1Q9NY12 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.68■□□□□ 0.26
GAR1Q9NY12 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.68■□□□□ 0.26
GAR1Q9NY12 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
GAR1Q9NY12 AC024257.2-201ENST00000549699 147 ntBASIC16.68■□□□□ 0.26
GAR1Q9NY12 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
GAR1Q9NY12 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.68■□□□□ 0.26
GAR1Q9NY12 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.68■□□□□ 0.26
GAR1Q9NY12 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.68■□□□□ 0.26
GAR1Q9NY12 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
GAR1Q9NY12 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms