Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 PCDHAC2-203ENST00000615316 3011 ntBASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CTPS2Q9NRF8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CTPS2Q9NRF8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 AL391422.3-201ENST00000603791 2761 ntBASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CTPS2Q9NRF8 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 CCDC92B-201ENST00000575506 885 ntBASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 TERF1P2-201ENST00000583350 1212 ntBASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 AC121338.2-201ENST00000622535 1744 ntBASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CTPS2Q9NRF8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 AC073314.1-201ENST00000568729 2216 ntBASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.15■□□□□ 0.66
CTPS2Q9NRF8 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
CTPS2Q9NRF8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CTPS2Q9NRF8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CTPS2Q9NRF8 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTPS2Q9NRF8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.14■□□□□ 0.65
CTPS2Q9NRF8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTPS2Q9NRF8 KRT18P14-201ENST00000534205 1250 ntBASIC19.14■□□□□ 0.65
CTPS2Q9NRF8 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTPS2Q9NRF8 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTPS2Q9NRF8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTPS2Q9NRF8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CTPS2Q9NRF8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.14■□□□□ 0.65
CTPS2Q9NRF8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
CTPS2Q9NRF8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTPS2Q9NRF8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CTPS2Q9NRF8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CTPS2Q9NRF8 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CTPS2Q9NRF8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms