Protein–RNA interactions for Protein: Q9H8M2

BRD9, Bromodomain-containing protein 9, humanhuman

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9Q9H8M2 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BRD9Q9H8M2 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
BRD9Q9H8M2 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
BRD9Q9H8M2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
BRD9Q9H8M2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 C1QBPP2-201ENST00000528754 825 ntBASIC21.4■■□□□ 1.02
BRD9Q9H8M2 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
BRD9Q9H8M2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
BRD9Q9H8M2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
BRD9Q9H8M2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
BRD9Q9H8M2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.02
BRD9Q9H8M2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.39■■□□□ 1.02
BRD9Q9H8M2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
BRD9Q9H8M2 MIR718-201ENST00000390190 70 ntBASIC21.39■■□□□ 1.01
BRD9Q9H8M2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRD9Q9H8M2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRD9Q9H8M2 RPPH1-201ENST00000516869 333 ntBASIC21.39■■□□□ 1.01
BRD9Q9H8M2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.39■■□□□ 1.01
BRD9Q9H8M2 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.39■■□□□ 1.01
BRD9Q9H8M2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BRD9Q9H8M2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
BRD9Q9H8M2 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
BRD9Q9H8M2 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.39■■□□□ 1.01
BRD9Q9H8M2 FAM99A-202ENST00000538190 1989 ntBASIC21.39■■□□□ 1.01
BRD9Q9H8M2 AC026471.6-201ENST00000622954 1905 ntBASIC21.39■■□□□ 1.01
BRD9Q9H8M2 AL117328.2-201ENST00000624617 1940 ntBASIC21.39■■□□□ 1.01
BRD9Q9H8M2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
BRD9Q9H8M2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRD9Q9H8M2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRD9Q9H8M2 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.38■■□□□ 1.01
BRD9Q9H8M2 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BRD9Q9H8M2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRD9Q9H8M2 AC007322.3-201ENST00000426526 701 ntBASIC21.38■■□□□ 1.01
BRD9Q9H8M2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.38■■□□□ 1.01
BRD9Q9H8M2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRD9Q9H8M2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
BRD9Q9H8M2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
BRD9Q9H8M2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
BRD9Q9H8M2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.38■■□□□ 1.01
BRD9Q9H8M2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.37■■□□□ 1.01
BRD9Q9H8M2 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.37■■□□□ 1.01
BRD9Q9H8M2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BRD9Q9H8M2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BRD9Q9H8M2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BRD9Q9H8M2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
BRD9Q9H8M2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BRD9Q9H8M2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BRD9Q9H8M2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BRD9Q9H8M2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BRD9Q9H8M2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms