Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CNTNAP4Q9C0A0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CNTNAP4Q9C0A0 AL049637.2-201ENST00000641778 930 ntBASIC26.34■■□□□ 1.81
CNTNAP4Q9C0A0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC26.33■■□□□ 1.81
CNTNAP4Q9C0A0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
CNTNAP4Q9C0A0 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
CNTNAP4Q9C0A0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CNTNAP4Q9C0A0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC26.33■■□□□ 1.81
CNTNAP4Q9C0A0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CNTNAP4Q9C0A0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC26.33■■□□□ 1.81
CNTNAP4Q9C0A0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CNTNAP4Q9C0A0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CNTNAP4Q9C0A0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC26.33■■□□□ 1.81
CNTNAP4Q9C0A0 FAM99A-202ENST00000538190 1989 ntBASIC26.33■■□□□ 1.81
CNTNAP4Q9C0A0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
CNTNAP4Q9C0A0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC26.33■■□□□ 1.8
CNTNAP4Q9C0A0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CNTNAP4Q9C0A0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CNTNAP4Q9C0A0 AC239809.2-201ENST00000415381 517 ntBASIC26.32■■□□□ 1.8
CNTNAP4Q9C0A0 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC26.32■■□□□ 1.8
CNTNAP4Q9C0A0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
CNTNAP4Q9C0A0 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.32■■□□□ 1.8
CNTNAP4Q9C0A0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC26.32■■□□□ 1.8
CNTNAP4Q9C0A0 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
CNTNAP4Q9C0A0 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC26.32■■□□□ 1.8
CNTNAP4Q9C0A0 AL023875.1-201ENST00000640777 796 ntBASIC26.32■■□□□ 1.8
CNTNAP4Q9C0A0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
CNTNAP4Q9C0A0 KRT17P2-201ENST00000300992 1314 ntBASIC26.32■■□□□ 1.8
CNTNAP4Q9C0A0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC26.31■■□□□ 1.8
CNTNAP4Q9C0A0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 AC005829.2-201ENST00000571422 1056 ntBASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 AC120498.8-201ENST00000614275 531 ntBASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
CNTNAP4Q9C0A0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CNTNAP4Q9C0A0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC26.29■■□□□ 1.8
CNTNAP4Q9C0A0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CNTNAP4Q9C0A0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
CNTNAP4Q9C0A0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC26.29■■□□□ 1.8
CNTNAP4Q9C0A0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC26.29■■□□□ 1.8
CNTNAP4Q9C0A0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CNTNAP4Q9C0A0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CNTNAP4Q9C0A0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC26.29■■□□□ 1.8
CNTNAP4Q9C0A0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC26.29■■□□□ 1.8
CNTNAP4Q9C0A0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CNTNAP4Q9C0A0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
CNTNAP4Q9C0A0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 AL135905.2-201ENST00000584934 1404 ntBASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CNTNAP4Q9C0A0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CNTNAP4Q9C0A0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CNTNAP4Q9C0A0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CNTNAP4Q9C0A0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC26.27■■□□□ 1.8
CNTNAP4Q9C0A0 AP001412.1-201ENST00000608405 714 ntBASIC26.27■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 8 ms