Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAF4Q9BUZ4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 AC011767.1-201ENST00000617410 1153 ntBASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRAF4Q9BUZ4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRAF4Q9BUZ4 Z98882.1-201ENST00000622160 2253 ntBASIC18.39■□□□□ 0.54
TRAF4Q9BUZ4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAF4Q9BUZ4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.39■□□□□ 0.54
TRAF4Q9BUZ4 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 AC079089.2-201ENST00000531211 1277 ntBASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 AC104187.1-201ENST00000607510 612 ntBASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 LINC01960-201ENST00000563759 1884 ntBASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAF4Q9BUZ4 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 AC006970.2-201ENST00000450065 779 ntBASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAF4Q9BUZ4 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms