Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.35■□□□□ 0.85
CCM2Q9BSQ5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCM2Q9BSQ5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CCM2Q9BSQ5 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCM2Q9BSQ5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCM2Q9BSQ5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.35■□□□□ 0.85
CCM2Q9BSQ5 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.35■□□□□ 0.85
CCM2Q9BSQ5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCM2Q9BSQ5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CCM2Q9BSQ5 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.35■□□□□ 0.85
CCM2Q9BSQ5 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 AC116050.2-201ENST00000612102 1779 ntBASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 CDV3P1-201ENST00000471403 739 ntBASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 AL162412.1-201ENST00000567129 965 ntBASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 AC068338.2-201ENST00000563278 1430 ntBASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCM2Q9BSQ5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCM2Q9BSQ5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCM2Q9BSQ5 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCM2Q9BSQ5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCM2Q9BSQ5 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCM2Q9BSQ5 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCM2Q9BSQ5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCM2Q9BSQ5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.33■□□□□ 0.85
CCM2Q9BSQ5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.33■□□□□ 0.85
CCM2Q9BSQ5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCM2Q9BSQ5 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCM2Q9BSQ5 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CCM2Q9BSQ5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.33■□□□□ 0.84
CCM2Q9BSQ5 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
CCM2Q9BSQ5 AC121338.2-201ENST00000622535 1744 ntBASIC20.33■□□□□ 0.84
CCM2Q9BSQ5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCM2Q9BSQ5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCM2Q9BSQ5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 AC007322.3-201ENST00000426526 701 ntBASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 AC005181.1-201ENST00000604782 1256 ntBASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 AC011484.1-201ENST00000377652 1995 ntBASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCM2Q9BSQ5 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.31■□□□□ 0.84
CCM2Q9BSQ5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCM2Q9BSQ5 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms