Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS2Q99743 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPAS2Q99743 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.17■□□□□ 0.82
NPAS2Q99743 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS2Q99743 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS2Q99743 AP004607.7-201ENST00000527152 1677 ntBASIC20.17■□□□□ 0.82
NPAS2Q99743 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS2Q99743 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
NPAS2Q99743 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NPAS2Q99743 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.17■□□□□ 0.82
NPAS2Q99743 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.17■□□□□ 0.82
NPAS2Q99743 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS2Q99743 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.17■□□□□ 0.82
NPAS2Q99743 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.17■□□□□ 0.82
NPAS2Q99743 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS2Q99743 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS2Q99743 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS2Q99743 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS2Q99743 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS2Q99743 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.17■□□□□ 0.82
NPAS2Q99743 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS2Q99743 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPAS2Q99743 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NPAS2Q99743 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.16■□□□□ 0.82
NPAS2Q99743 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.16■□□□□ 0.82
NPAS2Q99743 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NPAS2Q99743 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.16■□□□□ 0.82
NPAS2Q99743 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.16■□□□□ 0.82
NPAS2Q99743 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
NPAS2Q99743 KRT18P14-201ENST00000534205 1250 ntBASIC20.16■□□□□ 0.82
NPAS2Q99743 SMUG1P1-201ENST00000590640 811 ntBASIC20.16■□□□□ 0.82
NPAS2Q99743 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.16■□□□□ 0.82
NPAS2Q99743 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.16■□□□□ 0.82
NPAS2Q99743 LINC02228-203ENST00000641970 1355 ntBASIC20.16■□□□□ 0.82
NPAS2Q99743 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
NPAS2Q99743 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPAS2Q99743 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.16■□□□□ 0.82
NPAS2Q99743 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.15■□□□□ 0.82
NPAS2Q99743 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.15■□□□□ 0.82
NPAS2Q99743 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
NPAS2Q99743 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS2Q99743 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
NPAS2Q99743 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.15■□□□□ 0.82
NPAS2Q99743 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.15■□□□□ 0.82
NPAS2Q99743 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS2Q99743 AL034346.1-201ENST00000568244 1277 ntBASIC20.15■□□□□ 0.82
NPAS2Q99743 TPRG1LP1-201ENST00000598702 760 ntBASIC20.15■□□□□ 0.82
NPAS2Q99743 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS2Q99743 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS2Q99743 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS2Q99743 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS2Q99743 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS2Q99743 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS2Q99743 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS2Q99743 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS2Q99743 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.15■□□□□ 0.82
NPAS2Q99743 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS2Q99743 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NPAS2Q99743 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.15■□□□□ 0.82
NPAS2Q99743 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.14■□□□□ 0.82
NPAS2Q99743 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.14■□□□□ 0.82
NPAS2Q99743 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS2Q99743 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.14■□□□□ 0.81
NPAS2Q99743 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS2Q99743 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.14■□□□□ 0.81
NPAS2Q99743 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.14■□□□□ 0.81
NPAS2Q99743 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
NPAS2Q99743 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS2Q99743 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NPAS2Q99743 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS2Q99743 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.14■□□□□ 0.81
NPAS2Q99743 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.14■□□□□ 0.81
NPAS2Q99743 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NPAS2Q99743 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS2Q99743 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.14■□□□□ 0.81
NPAS2Q99743 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS2Q99743 RNF165-205ENST00000588679 2904 ntBASIC20.14■□□□□ 0.81
NPAS2Q99743 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS2Q99743 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS2Q99743 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS2Q99743 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPAS2Q99743 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS2Q99743 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS2Q99743 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS2Q99743 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS2Q99743 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NPAS2Q99743 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms