Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PCNX1Q96RV3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 AL355075.4-201ENST00000554988 638 ntBASIC18.28■□□□□ 0.52
PCNX1Q96RV3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.28■□□□□ 0.52
PCNX1Q96RV3 FAM21FP-204ENST00000608637 956 ntBASIC18.28■□□□□ 0.52
PCNX1Q96RV3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.27■□□□□ 0.52
PCNX1Q96RV3 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCNX1Q96RV3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCNX1Q96RV3 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.27■□□□□ 0.52
PCNX1Q96RV3 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PCNX1Q96RV3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCNX1Q96RV3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PCNX1Q96RV3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.27■□□□□ 0.52
PCNX1Q96RV3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.27■□□□□ 0.52
PCNX1Q96RV3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.27■□□□□ 0.52
PCNX1Q96RV3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCNX1Q96RV3 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCNX1Q96RV3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCNX1Q96RV3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
PCNX1Q96RV3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCNX1Q96RV3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCNX1Q96RV3 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.27■□□□□ 0.51
PCNX1Q96RV3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.27■□□□□ 0.51
PCNX1Q96RV3 HLA-B-256ENST00000639848 1089 ntBASIC18.27■□□□□ 0.51
PCNX1Q96RV3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
PCNX1Q96RV3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCNX1Q96RV3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCNX1Q96RV3 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
PCNX1Q96RV3 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 AL049637.2-201ENST00000641778 930 ntBASIC18.26■□□□□ 0.51
PCNX1Q96RV3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCNX1Q96RV3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.25■□□□□ 0.51
PCNX1Q96RV3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 BX088651.1-201ENST00000540551 451 ntBASIC18.25■□□□□ 0.51
PCNX1Q96RV3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCNX1Q96RV3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCNX1Q96RV3 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCNX1Q96RV3 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.24■□□□□ 0.51
PCNX1Q96RV3 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.24■□□□□ 0.51
PCNX1Q96RV3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCNX1Q96RV3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCNX1Q96RV3 FAM99A-202ENST00000538190 1989 ntBASIC18.24■□□□□ 0.51
PCNX1Q96RV3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCNX1Q96RV3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
PCNX1Q96RV3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCNX1Q96RV3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCNX1Q96RV3 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCNX1Q96RV3 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms