Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX18Q96RF0 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX18Q96RF0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX18Q96RF0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX18Q96RF0 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX18Q96RF0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX18Q96RF0 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX18Q96RF0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX18Q96RF0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX18Q96RF0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX18Q96RF0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX18Q96RF0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX18Q96RF0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX18Q96RF0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX18Q96RF0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX18Q96RF0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SNX18Q96RF0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.75■□□□□ 0.59
SNX18Q96RF0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.75■□□□□ 0.59
SNX18Q96RF0 AC087289.5-201ENST00000586076 3175 ntBASIC18.75■□□□□ 0.59
SNX18Q96RF0 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.75■□□□□ 0.59
SNX18Q96RF0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.75■□□□□ 0.59
SNX18Q96RF0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.75■□□□□ 0.59
SNX18Q96RF0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.75■□□□□ 0.59
SNX18Q96RF0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX18Q96RF0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.75■□□□□ 0.59
SNX18Q96RF0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SNX18Q96RF0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX18Q96RF0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX18Q96RF0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.74■□□□□ 0.59
SNX18Q96RF0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.74■□□□□ 0.59
SNX18Q96RF0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.74■□□□□ 0.59
SNX18Q96RF0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.74■□□□□ 0.59
SNX18Q96RF0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.74■□□□□ 0.59
SNX18Q96RF0 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.74■□□□□ 0.59
SNX18Q96RF0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX18Q96RF0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX18Q96RF0 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.74■□□□□ 0.59
SNX18Q96RF0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX18Q96RF0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX18Q96RF0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.73■□□□□ 0.59
SNX18Q96RF0 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX18Q96RF0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SNX18Q96RF0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SNX18Q96RF0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX18Q96RF0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SNX18Q96RF0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SNX18Q96RF0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
SNX18Q96RF0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.73■□□□□ 0.59
SNX18Q96RF0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX18Q96RF0 MIR6821-201ENST00000617625 74 ntBASIC18.73■□□□□ 0.59
SNX18Q96RF0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX18Q96RF0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX18Q96RF0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX18Q96RF0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.73■□□□□ 0.59
SNX18Q96RF0 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX18Q96RF0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX18Q96RF0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SNX18Q96RF0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SNX18Q96RF0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX18Q96RF0 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX18Q96RF0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX18Q96RF0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX18Q96RF0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX18Q96RF0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX18Q96RF0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.72■□□□□ 0.59
SNX18Q96RF0 AC097381.1-201ENST00000429019 1296 ntBASIC18.72■□□□□ 0.59
SNX18Q96RF0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX18Q96RF0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.72■□□□□ 0.59
SNX18Q96RF0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX18Q96RF0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX18Q96RF0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SNX18Q96RF0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNX18Q96RF0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX18Q96RF0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX18Q96RF0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX18Q96RF0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX18Q96RF0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SNX18Q96RF0 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SNX18Q96RF0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SNX18Q96RF0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.72■□□□□ 0.59
SNX18Q96RF0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX18Q96RF0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX18Q96RF0 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX18Q96RF0 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX18Q96RF0 AC012414.1-201ENST00000556676 535 ntBASIC18.71■□□□□ 0.59
SNX18Q96RF0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.71■□□□□ 0.59
SNX18Q96RF0 AC087623.3-201ENST00000607047 1098 ntBASIC18.71■□□□□ 0.59
SNX18Q96RF0 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX18Q96RF0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.71■□□□□ 0.59
SNX18Q96RF0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX18Q96RF0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX18Q96RF0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.71■□□□□ 0.59
SNX18Q96RF0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SNX18Q96RF0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.71■□□□□ 0.59
SNX18Q96RF0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.71■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms