Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL21A1Q96P44 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL21A1Q96P44 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL21A1Q96P44 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL21A1Q96P44 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL21A1Q96P44 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL21A1Q96P44 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL21A1Q96P44 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL21A1Q96P44 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL21A1Q96P44 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL21A1Q96P44 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL21A1Q96P44 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.48■□□□□ 0.71
COL21A1Q96P44 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL21A1Q96P44 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
COL21A1Q96P44 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL21A1Q96P44 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL21A1Q96P44 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
COL21A1Q96P44 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.48■□□□□ 0.71
COL21A1Q96P44 KRT18P5-201ENST00000436075 1291 ntBASIC19.48■□□□□ 0.71
COL21A1Q96P44 AL162430.1-201ENST00000480705 870 ntBASIC19.48■□□□□ 0.71
COL21A1Q96P44 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.48■□□□□ 0.71
COL21A1Q96P44 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.48■□□□□ 0.71
COL21A1Q96P44 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL21A1Q96P44 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL21A1Q96P44 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.48■□□□□ 0.71
COL21A1Q96P44 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL21A1Q96P44 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL21A1Q96P44 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.48■□□□□ 0.71
COL21A1Q96P44 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.48■□□□□ 0.71
COL21A1Q96P44 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL21A1Q96P44 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL21A1Q96P44 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 AC104187.1-201ENST00000607510 612 ntBASIC19.47■□□□□ 0.71
COL21A1Q96P44 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL21A1Q96P44 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL21A1Q96P44 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL21A1Q96P44 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
COL21A1Q96P44 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL21A1Q96P44 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL21A1Q96P44 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
COL21A1Q96P44 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
COL21A1Q96P44 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL21A1Q96P44 KRT19P1-201ENST00000405746 1186 ntBASIC19.46■□□□□ 0.71
COL21A1Q96P44 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL21A1Q96P44 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.46■□□□□ 0.71
COL21A1Q96P44 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL21A1Q96P44 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL21A1Q96P44 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL21A1Q96P44 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL21A1Q96P44 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL21A1Q96P44 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL21A1Q96P44 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.46■□□□□ 0.71
COL21A1Q96P44 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL21A1Q96P44 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL21A1Q96P44 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL21A1Q96P44 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL21A1Q96P44 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.45■□□□□ 0.7
COL21A1Q96P44 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.45■□□□□ 0.7
COL21A1Q96P44 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
COL21A1Q96P44 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.45■□□□□ 0.7
COL21A1Q96P44 KRT18P61-201ENST00000585825 1298 ntBASIC19.45■□□□□ 0.7
COL21A1Q96P44 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL21A1Q96P44 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.45■□□□□ 0.7
COL21A1Q96P44 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.44■□□□□ 0.7
COL21A1Q96P44 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms