Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SLC46A1Q96NT5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SLC46A1Q96NT5 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
SLC46A1Q96NT5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SLC46A1Q96NT5 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SLC46A1Q96NT5 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 AC079834.2-201ENST00000609776 1949 ntBASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 CDV3P1-201ENST00000471403 739 ntBASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 RPPH1-201ENST00000516869 333 ntBASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.82■□□□□ 0.76
SLC46A1Q96NT5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 AC003102.1-202ENST00000563394 1796 ntBASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 AL589743.5-201ENST00000616611 1050 ntBASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 FAM197Y4-202ENST00000622692 608 ntBASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC46A1Q96NT5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 KRT17P3-201ENST00000420566 1262 ntBASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 MIR4497-201ENST00000583208 89 ntBASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC46A1Q96NT5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 C1QBPP2-201ENST00000528754 825 ntBASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC46A1Q96NT5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 MCRIP2P1-201ENST00000394346 511 ntBASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 PNMA6B-201ENST00000538162 1200 ntBASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 RN7SL471P-201ENST00000580476 299 ntBASIC19.78■□□□□ 0.76
SLC46A1Q96NT5 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms