Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 MYCNOS-205ENST00000641950 531 ntBASIC19.86■□□□□ 0.77
UBE2E3Q969T4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
UBE2E3Q969T4 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 RBM17P2-201ENST00000616397 1405 ntBASIC19.85■□□□□ 0.77
UBE2E3Q969T4 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 UBE2DNL-204ENST00000602536 740 ntBASIC19.85■□□□□ 0.77
UBE2E3Q969T4 MIR5787-201ENST00000611784 55 ntBASIC19.85■□□□□ 0.77
UBE2E3Q969T4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 AC116050.2-201ENST00000612102 1779 ntBASIC19.85■□□□□ 0.77
UBE2E3Q969T4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.85■□□□□ 0.77
UBE2E3Q969T4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.84■□□□□ 0.77
UBE2E3Q969T4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
UBE2E3Q969T4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 KRT18P5-201ENST00000436075 1291 ntBASIC19.83■□□□□ 0.77
UBE2E3Q969T4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
UBE2E3Q969T4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2E3Q969T4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2E3Q969T4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.83■□□□□ 0.76
UBE2E3Q969T4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2E3Q969T4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2E3Q969T4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.83■□□□□ 0.76
UBE2E3Q969T4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
UBE2E3Q969T4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 AC137761.2-201ENST00000561729 223 ntBASIC19.82■□□□□ 0.76
UBE2E3Q969T4 AC145350.3-201ENST00000569033 163 ntBASIC19.82■□□□□ 0.76
UBE2E3Q969T4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
UBE2E3Q969T4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms