Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.73■■□□□ 1.07
ATP2A3Q93084 MIPEPP3-201ENST00000412105 444 ntBASIC21.73■■□□□ 1.07
ATP2A3Q93084 AL512625.2-201ENST00000417533 625 ntBASIC21.73■■□□□ 1.07
ATP2A3Q93084 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC21.73■■□□□ 1.07
ATP2A3Q93084 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP2A3Q93084 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.73■■□□□ 1.07
ATP2A3Q93084 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.73■■□□□ 1.07
ATP2A3Q93084 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A3Q93084 FAM99A-202ENST00000538190 1989 ntBASIC21.73■■□□□ 1.07
ATP2A3Q93084 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A3Q93084 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A3Q93084 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.73■■□□□ 1.07
ATP2A3Q93084 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
ATP2A3Q93084 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.72■■□□□ 1.07
ATP2A3Q93084 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A3Q93084 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.72■■□□□ 1.07
ATP2A3Q93084 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A3Q93084 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A3Q93084 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A3Q93084 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.72■■□□□ 1.07
ATP2A3Q93084 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
ATP2A3Q93084 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A3Q93084 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A3Q93084 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.72■■□□□ 1.07
ATP2A3Q93084 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A3Q93084 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.72■■□□□ 1.07
ATP2A3Q93084 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A3Q93084 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.72■■□□□ 1.07
ATP2A3Q93084 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.72■■□□□ 1.07
ATP2A3Q93084 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A3Q93084 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.72■■□□□ 1.07
ATP2A3Q93084 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
ATP2A3Q93084 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A3Q93084 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.72■■□□□ 1.07
ATP2A3Q93084 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
ATP2A3Q93084 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.71■■□□□ 1.07
ATP2A3Q93084 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A3Q93084 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A3Q93084 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A3Q93084 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.71■■□□□ 1.07
ATP2A3Q93084 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.71■■□□□ 1.07
ATP2A3Q93084 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A3Q93084 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.71■■□□□ 1.07
ATP2A3Q93084 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.71■■□□□ 1.07
ATP2A3Q93084 AL162412.1-201ENST00000567129 965 ntBASIC21.71■■□□□ 1.07
ATP2A3Q93084 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.71■■□□□ 1.07
ATP2A3Q93084 AC016405.3-201ENST00000607710 860 ntBASIC21.71■■□□□ 1.07
ATP2A3Q93084 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.71■■□□□ 1.07
ATP2A3Q93084 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.71■■□□□ 1.07
ATP2A3Q93084 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A3Q93084 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A3Q93084 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.71■■□□□ 1.07
ATP2A3Q93084 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A3Q93084 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
ATP2A3Q93084 RBM17P2-201ENST00000616397 1405 ntBASIC21.71■■□□□ 1.07
ATP2A3Q93084 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.7■■□□□ 1.07
ATP2A3Q93084 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
ATP2A3Q93084 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP2A3Q93084 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC21.7■■□□□ 1.06
ATP2A3Q93084 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP2A3Q93084 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
ATP2A3Q93084 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP2A3Q93084 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP2A3Q93084 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
ATP2A3Q93084 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.7■■□□□ 1.06
ATP2A3Q93084 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.7■■□□□ 1.06
ATP2A3Q93084 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP2A3Q93084 AL591742.1-201ENST00000604433 565 ntBASIC21.7■■□□□ 1.06
ATP2A3Q93084 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
ATP2A3Q93084 AC026310.3-201ENST00000625186 2373 ntBASIC21.7■■□□□ 1.06
ATP2A3Q93084 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
ATP2A3Q93084 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.7■■□□□ 1.06
ATP2A3Q93084 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A3Q93084 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.69■■□□□ 1.06
ATP2A3Q93084 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A3Q93084 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A3Q93084 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ATP2A3Q93084 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
ATP2A3Q93084 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP2A3Q93084 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A3Q93084 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.69■■□□□ 1.06
ATP2A3Q93084 AC093787.1-201ENST00000450396 207 ntBASIC21.69■■□□□ 1.06
ATP2A3Q93084 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP2A3Q93084 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.69■■□□□ 1.06
ATP2A3Q93084 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A3Q93084 AC243732.1-201ENST00000612648 864 ntBASIC21.69■■□□□ 1.06
ATP2A3Q93084 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.69■■□□□ 1.06
ATP2A3Q93084 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP2A3Q93084 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.69■■□□□ 1.06
ATP2A3Q93084 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A3Q93084 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A3Q93084 AC003102.1-202ENST00000563394 1796 ntBASIC21.69■■□□□ 1.06
ATP2A3Q93084 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A3Q93084 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.69■■□□□ 1.06
ATP2A3Q93084 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
ATP2A3Q93084 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A3Q93084 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
ATP2A3Q93084 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP2A3Q93084 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.68■■□□□ 1.06
ATP2A3Q93084 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms