Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTN4IP1Q8WWV3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 AC105265.2-201ENST00000467189 838 ntBASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 AL391422.3-201ENST00000603791 2761 ntBASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RTN4IP1Q8WWV3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 PCDHAC2-203ENST00000615316 3011 ntBASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.34■□□□□ 0.37
RTN4IP1Q8WWV3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.33■□□□□ 0.37
RTN4IP1Q8WWV3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
RTN4IP1Q8WWV3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.33■□□□□ 0.37
RTN4IP1Q8WWV3 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RTN4IP1Q8WWV3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.33■□□□□ 0.37
RTN4IP1Q8WWV3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
RTN4IP1Q8WWV3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
RTN4IP1Q8WWV3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.33■□□□□ 0.37
RTN4IP1Q8WWV3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
RTN4IP1Q8WWV3 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RTN4IP1Q8WWV3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 AP006587.3-201ENST00000525742 1516 ntBASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 AC009237.3-201ENST00000393279 1427 ntBASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 AC012414.1-201ENST00000556676 535 ntBASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 AL354811.1-201ENST00000610286 706 ntBASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RTN4IP1Q8WWV3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms