Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 AC099778.1-201ENST00000568593 1911 ntBASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SLC44A1Q8WWI5 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 AC061975.6-201ENST00000579045 1553 ntBASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A1Q8WWI5 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 AC027682.1-201ENST00000562846 899 ntBASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SLC44A1Q8WWI5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 MIR572-201ENST00000384983 95 ntBASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.71■□□□□ 0.91
SLC44A1Q8WWI5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SLC44A1Q8WWI5 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
SLC44A1Q8WWI5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.7■□□□□ 0.91
SLC44A1Q8WWI5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC44A1Q8WWI5 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.7■□□□□ 0.9
SLC44A1Q8WWI5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.7■□□□□ 0.9
SLC44A1Q8WWI5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.7■□□□□ 0.9
SLC44A1Q8WWI5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC44A1Q8WWI5 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC44A1Q8WWI5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SLC44A1Q8WWI5 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC44A1Q8WWI5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SLC44A1Q8WWI5 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.7■□□□□ 0.9
SLC44A1Q8WWI5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC44A1Q8WWI5 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SLC44A1Q8WWI5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SLC44A1Q8WWI5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SLC44A1Q8WWI5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.68■□□□□ 0.9
SLC44A1Q8WWI5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms