Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.65
SNED1Q8TER0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
SNED1Q8TER0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.39■■□□□ 1.65
SNED1Q8TER0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.39■■□□□ 1.65
SNED1Q8TER0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.39■■□□□ 1.65
SNED1Q8TER0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC25.38■■□□□ 1.65
SNED1Q8TER0 TSPY15P-201ENST00000457163 923 ntBASIC25.38■■□□□ 1.65
SNED1Q8TER0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SNED1Q8TER0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC25.38■■□□□ 1.65
SNED1Q8TER0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC25.38■■□□□ 1.65
SNED1Q8TER0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC25.38■■□□□ 1.65
SNED1Q8TER0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
SNED1Q8TER0 AL049637.2-201ENST00000641778 930 ntBASIC25.38■■□□□ 1.65
SNED1Q8TER0 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
SNED1Q8TER0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SNED1Q8TER0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC25.38■■□□□ 1.65
SNED1Q8TER0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SNED1Q8TER0 AC010542.4-201ENST00000563151 1910 ntBASIC25.38■■□□□ 1.65
SNED1Q8TER0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SNED1Q8TER0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SNED1Q8TER0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SNED1Q8TER0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
SNED1Q8TER0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SNED1Q8TER0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SNED1Q8TER0 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
SNED1Q8TER0 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC25.37■■□□□ 1.65
SNED1Q8TER0 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SNED1Q8TER0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.37■■□□□ 1.65
SNED1Q8TER0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNED1Q8TER0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SNED1Q8TER0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
SNED1Q8TER0 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC25.37■■□□□ 1.65
SNED1Q8TER0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNED1Q8TER0 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SNED1Q8TER0 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC25.37■■□□□ 1.65
SNED1Q8TER0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
SNED1Q8TER0 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC25.37■■□□□ 1.65
SNED1Q8TER0 HES2-205ENST00000487437 968 ntTSL 3 BASIC25.37■■□□□ 1.65
SNED1Q8TER0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC25.37■■□□□ 1.65
SNED1Q8TER0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNED1Q8TER0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SNED1Q8TER0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.36■■□□□ 1.65
SNED1Q8TER0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SNED1Q8TER0 C1orf229-201ENST00000623686 2258 ntBASIC25.36■■□□□ 1.65
SNED1Q8TER0 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.36■■□□□ 1.65
SNED1Q8TER0 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC25.36■■□□□ 1.65
SNED1Q8TER0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
SNED1Q8TER0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC25.36■■□□□ 1.65
SNED1Q8TER0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SNED1Q8TER0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
SNED1Q8TER0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SNED1Q8TER0 AC113410.3-201ENST00000623366 203 ntBASIC25.36■■□□□ 1.65
SNED1Q8TER0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC25.36■■□□□ 1.65
SNED1Q8TER0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.35■■□□□ 1.65
SNED1Q8TER0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SNED1Q8TER0 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC25.35■■□□□ 1.65
SNED1Q8TER0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SNED1Q8TER0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SNED1Q8TER0 ABHD17AP6-201ENST00000458502 1044 ntBASIC25.35■■□□□ 1.65
SNED1Q8TER0 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SNED1Q8TER0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SNED1Q8TER0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC25.35■■□□□ 1.65
SNED1Q8TER0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC25.35■■□□□ 1.65
SNED1Q8TER0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC25.35■■□□□ 1.65
SNED1Q8TER0 AC097493.4-201ENST00000641197 219 ntBASIC25.35■■□□□ 1.65
SNED1Q8TER0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SNED1Q8TER0 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SNED1Q8TER0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SNED1Q8TER0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SNED1Q8TER0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
SNED1Q8TER0 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SNED1Q8TER0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SNED1Q8TER0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SNED1Q8TER0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SNED1Q8TER0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SNED1Q8TER0 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SNED1Q8TER0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC25.34■■□□□ 1.65
SNED1Q8TER0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SNED1Q8TER0 AC087499.1-201ENST00000418141 1075 ntBASIC25.34■■□□□ 1.65
SNED1Q8TER0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC25.34■■□□□ 1.65
SNED1Q8TER0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC25.34■■□□□ 1.65
SNED1Q8TER0 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SNED1Q8TER0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC25.34■■□□□ 1.65
SNED1Q8TER0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SNED1Q8TER0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC25.34■■□□□ 1.65
SNED1Q8TER0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SNED1Q8TER0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.34■■□□□ 1.65
SNED1Q8TER0 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC25.33■■□□□ 1.65
SNED1Q8TER0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
SNED1Q8TER0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
SNED1Q8TER0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
SNED1Q8TER0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
SNED1Q8TER0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
SNED1Q8TER0 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
SNED1Q8TER0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
SNED1Q8TER0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC25.33■■□□□ 1.65
SNED1Q8TER0 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC25.33■■□□□ 1.65
SNED1Q8TER0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC25.33■■□□□ 1.65
SNED1Q8TER0 AC087633.2-202ENST00000565166 1439 ntBASIC25.33■■□□□ 1.65
SNED1Q8TER0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms