Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD6Q8TD26 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD6Q8TD26 AL671277.2-201ENST00000458060 996 ntBASIC18.96■□□□□ 0.63
CHD6Q8TD26 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD6Q8TD26 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD6Q8TD26 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD6Q8TD26 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CHD6Q8TD26 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD6Q8TD26 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD6Q8TD26 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD6Q8TD26 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD6Q8TD26 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.96■□□□□ 0.63
CHD6Q8TD26 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.96■□□□□ 0.63
CHD6Q8TD26 AC010203.1-204ENST00000548782 407 ntBASIC18.96■□□□□ 0.63
CHD6Q8TD26 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.96■□□□□ 0.63
CHD6Q8TD26 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CHD6Q8TD26 ECEL1P2-202ENST00000465689 757 ntBASIC18.95■□□□□ 0.62
CHD6Q8TD26 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD6Q8TD26 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.95■□□□□ 0.62
CHD6Q8TD26 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHD6Q8TD26 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CHD6Q8TD26 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CHD6Q8TD26 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD6Q8TD26 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHD6Q8TD26 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.95■□□□□ 0.62
CHD6Q8TD26 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CHD6Q8TD26 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.95■□□□□ 0.62
CHD6Q8TD26 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
CHD6Q8TD26 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC18.95■□□□□ 0.62
CHD6Q8TD26 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHD6Q8TD26 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC18.94■□□□□ 0.62
CHD6Q8TD26 PCED1CP-201ENST00000419887 785 ntBASIC18.94■□□□□ 0.62
CHD6Q8TD26 CKBP1-201ENST00000565489 1086 ntBASIC18.94■□□□□ 0.62
CHD6Q8TD26 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.94■□□□□ 0.62
CHD6Q8TD26 AP004607.7-201ENST00000527152 1677 ntBASIC18.94■□□□□ 0.62
CHD6Q8TD26 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.94■□□□□ 0.62
CHD6Q8TD26 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD6Q8TD26 AL355385.1-201ENST00000606123 409 ntBASIC18.94■□□□□ 0.62
CHD6Q8TD26 AC139887.4-201ENST00000607877 719 ntBASIC18.94■□□□□ 0.62
CHD6Q8TD26 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.94■□□□□ 0.62
CHD6Q8TD26 FAM87A-204ENST00000613235 858 ntBASIC18.94■□□□□ 0.62
CHD6Q8TD26 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.94■□□□□ 0.62
CHD6Q8TD26 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD6Q8TD26 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD6Q8TD26 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD6Q8TD26 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.94■□□□□ 0.62
CHD6Q8TD26 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHD6Q8TD26 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD6Q8TD26 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.93■□□□□ 0.62
CHD6Q8TD26 AC009078.2-202ENST00000463353 338 ntBASIC18.93■□□□□ 0.62
CHD6Q8TD26 FAM86EP-206ENST00000510506 987 ntBASIC18.93■□□□□ 0.62
CHD6Q8TD26 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.93■□□□□ 0.62
CHD6Q8TD26 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD6Q8TD26 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHD6Q8TD26 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD6Q8TD26 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.93■□□□□ 0.62
CHD6Q8TD26 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD6Q8TD26 LINC00543-201ENST00000567234 1845 ntBASIC18.93■□□□□ 0.62
CHD6Q8TD26 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHD6Q8TD26 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.93■□□□□ 0.62
CHD6Q8TD26 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD6Q8TD26 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD6Q8TD26 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD6Q8TD26 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CHD6Q8TD26 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.92■□□□□ 0.62
CHD6Q8TD26 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC18.92■□□□□ 0.62
CHD6Q8TD26 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHD6Q8TD26 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHD6Q8TD26 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHD6Q8TD26 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CHD6Q8TD26 AC091390.4-202ENST00000476426 537 ntBASIC18.92■□□□□ 0.62
CHD6Q8TD26 YBX1P2-201ENST00000489612 999 ntBASIC18.92■□□□□ 0.62
CHD6Q8TD26 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.92■□□□□ 0.62
CHD6Q8TD26 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.92■□□□□ 0.62
CHD6Q8TD26 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.92■□□□□ 0.62
CHD6Q8TD26 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.92■□□□□ 0.62
CHD6Q8TD26 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHD6Q8TD26 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD6Q8TD26 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHD6Q8TD26 TSPY21P-201ENST00000433481 731 ntBASIC18.91■□□□□ 0.62
CHD6Q8TD26 TSPY23P-201ENST00000440136 739 ntBASIC18.91■□□□□ 0.62
CHD6Q8TD26 AC092647.4-201ENST00000457211 535 ntBASIC18.91■□□□□ 0.62
CHD6Q8TD26 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD6Q8TD26 AC005829.2-201ENST00000571422 1056 ntBASIC18.91■□□□□ 0.62
CHD6Q8TD26 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD6Q8TD26 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD6Q8TD26 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CHD6Q8TD26 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD6Q8TD26 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.91■□□□□ 0.62
CHD6Q8TD26 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CHD6Q8TD26 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHD6Q8TD26 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.9■□□□□ 0.62
CHD6Q8TD26 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD6Q8TD26 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD6Q8TD26 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.9■□□□□ 0.62
CHD6Q8TD26 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD6Q8TD26 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHD6Q8TD26 AC069148.1-201ENST00000608741 768 ntBASIC18.9■□□□□ 0.62
CHD6Q8TD26 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
CHD6Q8TD26 KRT18P68-201ENST00000392293 1000 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms