Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
C3orf56Q8N813 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
C3orf56Q8N813 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf56Q8N813 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf56Q8N813 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C3orf56Q8N813 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C3orf56Q8N813 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.19■□□□□ 0.18
C3orf56Q8N813 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.19■□□□□ 0.18
C3orf56Q8N813 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.19■□□□□ 0.18
C3orf56Q8N813 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 AC124016.1-201ENST00000609552 612 ntBASIC16.19■□□□□ 0.18
C3orf56Q8N813 AC110285.5-201ENST00000611501 352 ntBASIC16.19■□□□□ 0.18
C3orf56Q8N813 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
C3orf56Q8N813 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
C3orf56Q8N813 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC16.19■□□□□ 0.18
C3orf56Q8N813 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C3orf56Q8N813 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
C3orf56Q8N813 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
C3orf56Q8N813 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.18■□□□□ 0.18
C3orf56Q8N813 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.18■□□□□ 0.18
C3orf56Q8N813 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
C3orf56Q8N813 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.18■□□□□ 0.18
C3orf56Q8N813 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.18■□□□□ 0.18
C3orf56Q8N813 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC16.18■□□□□ 0.18
C3orf56Q8N813 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
C3orf56Q8N813 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
C3orf56Q8N813 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
C3orf56Q8N813 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C3orf56Q8N813 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
C3orf56Q8N813 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
C3orf56Q8N813 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
C3orf56Q8N813 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
C3orf56Q8N813 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
C3orf56Q8N813 TSPY15P-201ENST00000457163 923 ntBASIC16.17■□□□□ 0.18
C3orf56Q8N813 AC133681.1-201ENST00000465482 601 ntBASIC16.17■□□□□ 0.18
C3orf56Q8N813 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.17■□□□□ 0.18
C3orf56Q8N813 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.17■□□□□ 0.18
C3orf56Q8N813 AL355075.4-201ENST00000554988 638 ntBASIC16.17■□□□□ 0.18
C3orf56Q8N813 RN7SL850P-201ENST00000579959 291 ntBASIC16.17■□□□□ 0.18
C3orf56Q8N813 MTDHP1-201ENST00000605323 784 ntBASIC16.17■□□□□ 0.18
C3orf56Q8N813 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.17■□□□□ 0.18
C3orf56Q8N813 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
C3orf56Q8N813 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
C3orf56Q8N813 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C3orf56Q8N813 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
C3orf56Q8N813 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.17■□□□□ 0.18
C3orf56Q8N813 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C3orf56Q8N813 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
C3orf56Q8N813 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C3orf56Q8N813 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
C3orf56Q8N813 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C3orf56Q8N813 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C3orf56Q8N813 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
C3orf56Q8N813 KRASP1-201ENST00000407852 552 ntBASIC16.16■□□□□ 0.18
C3orf56Q8N813 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
C3orf56Q8N813 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.16■□□□□ 0.18
C3orf56Q8N813 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.16■□□□□ 0.18
C3orf56Q8N813 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C3orf56Q8N813 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C3orf56Q8N813 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C3orf56Q8N813 AC012306.2-201ENST00000609350 630 ntBASIC16.16■□□□□ 0.18
C3orf56Q8N813 AC113410.3-201ENST00000623366 203 ntBASIC16.16■□□□□ 0.18
C3orf56Q8N813 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.16■□□□□ 0.18
C3orf56Q8N813 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C3orf56Q8N813 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
C3orf56Q8N813 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C3orf56Q8N813 CLDN5-201ENST00000403084 2357 ntBASIC16.16■□□□□ 0.18
C3orf56Q8N813 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
C3orf56Q8N813 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
C3orf56Q8N813 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
C3orf56Q8N813 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.16■□□□□ 0.18
C3orf56Q8N813 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms