Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
CPSF7Q8N684 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPSF7Q8N684 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CPSF7Q8N684 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF7Q8N684 AFG3L1P-217ENST00000557444 2447 ntBASIC20.16■□□□□ 0.82
CPSF7Q8N684 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.16■□□□□ 0.82
CPSF7Q8N684 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF7Q8N684 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF7Q8N684 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CPSF7Q8N684 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
CPSF7Q8N684 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF7Q8N684 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CPSF7Q8N684 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF7Q8N684 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.16■□□□□ 0.82
CPSF7Q8N684 AP005435.1-201ENST00000529293 1178 ntBASIC20.16■□□□□ 0.82
CPSF7Q8N684 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.16■□□□□ 0.82
CPSF7Q8N684 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.16■□□□□ 0.82
CPSF7Q8N684 MIR6084-201ENST00000622012 110 ntBASIC20.16■□□□□ 0.82
CPSF7Q8N684 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF7Q8N684 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.16■□□□□ 0.82
CPSF7Q8N684 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF7Q8N684 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF7Q8N684 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.16■□□□□ 0.82
CPSF7Q8N684 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF7Q8N684 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CPSF7Q8N684 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 AL391422.3-201ENST00000603791 2761 ntBASIC20.15■□□□□ 0.82
CPSF7Q8N684 YBX1P1-201ENST00000445822 960 ntBASIC20.15■□□□□ 0.82
CPSF7Q8N684 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF7Q8N684 AL358852.1-201ENST00000623174 1268 ntBASIC20.15■□□□□ 0.82
CPSF7Q8N684 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CPSF7Q8N684 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.15■□□□□ 0.82
CPSF7Q8N684 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CPSF7Q8N684 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CPSF7Q8N684 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.14■□□□□ 0.81
CPSF7Q8N684 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
CPSF7Q8N684 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF7Q8N684 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF7Q8N684 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
CPSF7Q8N684 AC012414.1-201ENST00000556676 535 ntBASIC20.14■□□□□ 0.81
CPSF7Q8N684 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CPSF7Q8N684 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.13■□□□□ 0.81
CPSF7Q8N684 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.13■□□□□ 0.81
CPSF7Q8N684 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.13■□□□□ 0.81
CPSF7Q8N684 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.13■□□□□ 0.81
CPSF7Q8N684 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
CPSF7Q8N684 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF7Q8N684 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF7Q8N684 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF7Q8N684 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF7Q8N684 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.13■□□□□ 0.81
CPSF7Q8N684 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF7Q8N684 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF7Q8N684 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CPSF7Q8N684 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF7Q8N684 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.13■□□□□ 0.81
CPSF7Q8N684 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF7Q8N684 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.13■□□□□ 0.81
CPSF7Q8N684 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF7Q8N684 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF7Q8N684 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CPSF7Q8N684 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.13■□□□□ 0.81
CPSF7Q8N684 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF7Q8N684 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF7Q8N684 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CPSF7Q8N684 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC20.13■□□□□ 0.81
CPSF7Q8N684 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CPSF7Q8N684 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.12■□□□□ 0.81
CPSF7Q8N684 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.12■□□□□ 0.81
CPSF7Q8N684 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CPSF7Q8N684 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.12■□□□□ 0.81
CPSF7Q8N684 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.12■□□□□ 0.81
CPSF7Q8N684 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.12■□□□□ 0.81
CPSF7Q8N684 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CPSF7Q8N684 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CPSF7Q8N684 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms