Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
SYNPOQ8N3V7 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SYNPOQ8N3V7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.08■□□□□ 0.96
SYNPOQ8N3V7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 AC007322.3-201ENST00000426526 701 ntBASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SYNPOQ8N3V7 LINC00565-201ENST00000562710 2331 ntBASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.06■□□□□ 0.96
SYNPOQ8N3V7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SYNPOQ8N3V7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 AC073912.3-201ENST00000624414 853 ntBASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SYNPOQ8N3V7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 AC069544.1-201ENST00000609399 999 ntBASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
SYNPOQ8N3V7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms