Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC32.54■■■□□ 2.8
VPS8Q8N3P4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
VPS8Q8N3P4 AC026310.3-201ENST00000625186 2373 ntBASIC32.54■■■□□ 2.8
VPS8Q8N3P4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC32.54■■■□□ 2.8
VPS8Q8N3P4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
VPS8Q8N3P4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
VPS8Q8N3P4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC32.54■■■□□ 2.8
VPS8Q8N3P4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
VPS8Q8N3P4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC32.54■■■□□ 2.8
VPS8Q8N3P4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC32.53■■■□□ 2.8
VPS8Q8N3P4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC32.53■■■□□ 2.8
VPS8Q8N3P4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC32.53■■■□□ 2.8
VPS8Q8N3P4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
VPS8Q8N3P4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC32.53■■■□□ 2.8
VPS8Q8N3P4 AC105020.6-201ENST00000621523 1217 ntBASIC32.53■■■□□ 2.8
VPS8Q8N3P4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
VPS8Q8N3P4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
VPS8Q8N3P4 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
VPS8Q8N3P4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
VPS8Q8N3P4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
VPS8Q8N3P4 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC32.53■■■□□ 2.8
VPS8Q8N3P4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC32.53■■■□□ 2.8
VPS8Q8N3P4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 DUSP5P2-201ENST00000426873 1033 ntBASIC32.52■■■□□ 2.8
VPS8Q8N3P4 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
VPS8Q8N3P4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.8
VPS8Q8N3P4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.8
VPS8Q8N3P4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC32.51■■■□□ 2.8
VPS8Q8N3P4 AC091874.3-201ENST00000512672 1195 ntBASIC32.51■■■□□ 2.8
VPS8Q8N3P4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.8
VPS8Q8N3P4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.8
VPS8Q8N3P4 AC133041.1-202ENST00000642053 222 ntBASIC32.51■■■□□ 2.8
VPS8Q8N3P4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC32.51■■■□□ 2.79
VPS8Q8N3P4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
VPS8Q8N3P4 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
VPS8Q8N3P4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
VPS8Q8N3P4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC32.51■■■□□ 2.79
VPS8Q8N3P4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC32.51■■■□□ 2.79
VPS8Q8N3P4 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC32.51■■■□□ 2.79
VPS8Q8N3P4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
VPS8Q8N3P4 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC32.51■■■□□ 2.79
VPS8Q8N3P4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC32.51■■■□□ 2.79
VPS8Q8N3P4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC32.51■■■□□ 2.79
VPS8Q8N3P4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.79
VPS8Q8N3P4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC32.5■■■□□ 2.79
VPS8Q8N3P4 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC32.5■■■□□ 2.79
VPS8Q8N3P4 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC32.5■■■□□ 2.79
VPS8Q8N3P4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC32.5■■■□□ 2.79
VPS8Q8N3P4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
VPS8Q8N3P4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
VPS8Q8N3P4 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
VPS8Q8N3P4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC32.5■■■□□ 2.79
VPS8Q8N3P4 AC011484.1-201ENST00000377652 1995 ntBASIC32.5■■■□□ 2.79
VPS8Q8N3P4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
VPS8Q8N3P4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC32.5■■■□□ 2.79
VPS8Q8N3P4 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
VPS8Q8N3P4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC32.49■■■□□ 2.79
VPS8Q8N3P4 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
VPS8Q8N3P4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
VPS8Q8N3P4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
VPS8Q8N3P4 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
VPS8Q8N3P4 AF106564.1-201ENST00000607058 2553 ntBASIC32.49■■■□□ 2.79
VPS8Q8N3P4 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
VPS8Q8N3P4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC32.49■■■□□ 2.79
VPS8Q8N3P4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC32.48■■■□□ 2.79
VPS8Q8N3P4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC32.47■■■□□ 2.79
VPS8Q8N3P4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC32.47■■■□□ 2.79
VPS8Q8N3P4 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
VPS8Q8N3P4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC32.47■■■□□ 2.79
VPS8Q8N3P4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC32.47■■■□□ 2.79
VPS8Q8N3P4 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC32.47■■■□□ 2.79
VPS8Q8N3P4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC32.47■■■□□ 2.79
VPS8Q8N3P4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
VPS8Q8N3P4 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC32.46■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms