Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 AC073648.6-201ENST00000641589 218 ntBASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 CDV3P1-201ENST00000471403 739 ntBASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 AC069544.1-201ENST00000609399 999 ntBASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 FBXW4P1-201ENST00000426721 2239 ntBASIC17.74■□□□□ 0.43
RAI1Q7Z5J4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAI1Q7Z5J4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAI1Q7Z5J4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RAI1Q7Z5J4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAI1Q7Z5J4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAI1Q7Z5J4 AL596275.1-201ENST00000423464 877 ntBASIC17.73■□□□□ 0.43
RAI1Q7Z5J4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.73■□□□□ 0.43
RAI1Q7Z5J4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RAI1Q7Z5J4 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAI1Q7Z5J4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAI1Q7Z5J4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.73■□□□□ 0.43
RAI1Q7Z5J4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 AP006294.2-201ENST00000641667 209 ntBASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.72■□□□□ 0.43
RAI1Q7Z5J4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 AC105020.6-201ENST00000621523 1217 ntBASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.71■□□□□ 0.43
RAI1Q7Z5J4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RAI1Q7Z5J4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.71■□□□□ 0.42
RAI1Q7Z5J4 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
RAI1Q7Z5J4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RAI1Q7Z5J4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms