Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.01■□□□□ 0.63
ZNF550Q7Z398 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF550Q7Z398 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF550Q7Z398 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19■□□□□ 0.63
ZNF550Q7Z398 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF550Q7Z398 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19■□□□□ 0.63
ZNF550Q7Z398 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
ZNF550Q7Z398 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19■□□□□ 0.63
ZNF550Q7Z398 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19■□□□□ 0.63
ZNF550Q7Z398 AC245052.3-201ENST00000450182 901 ntBASIC19■□□□□ 0.63
ZNF550Q7Z398 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19■□□□□ 0.63
ZNF550Q7Z398 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC19■□□□□ 0.63
ZNF550Q7Z398 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19■□□□□ 0.63
ZNF550Q7Z398 AP001160.3-201ENST00000601484 763 ntBASIC19■□□□□ 0.63
ZNF550Q7Z398 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF550Q7Z398 EXOC3-AS1-202ENST00000623673 1663 ntBASIC19■□□□□ 0.63
ZNF550Q7Z398 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF550Q7Z398 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
ZNF550Q7Z398 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF550Q7Z398 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19■□□□□ 0.63
ZNF550Q7Z398 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 KRT18P20-201ENST00000548986 1279 ntBASIC18.99■□□□□ 0.63
ZNF550Q7Z398 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
ZNF550Q7Z398 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 AC004854.2-201ENST00000608450 1441 ntBASIC18.98■□□□□ 0.63
ZNF550Q7Z398 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF550Q7Z398 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 AC011484.1-201ENST00000377652 1995 ntBASIC18.97■□□□□ 0.63
ZNF550Q7Z398 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 AC137761.2-201ENST00000561729 223 ntBASIC18.97■□□□□ 0.63
ZNF550Q7Z398 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 AC145350.3-201ENST00000569033 163 ntBASIC18.97■□□□□ 0.63
ZNF550Q7Z398 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
ZNF550Q7Z398 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms