Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 AC027702.1-201ENST00000563810 1770 ntBASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 AC007225.1-201ENST00000566331 1836 ntBASIC17.82■□□□□ 0.44
COLCA1Q6ZS62 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.81■□□□□ 0.44
COLCA1Q6ZS62 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COLCA1Q6ZS62 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COLCA1Q6ZS62 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COLCA1Q6ZS62 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
COLCA1Q6ZS62 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COLCA1Q6ZS62 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COLCA1Q6ZS62 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.81■□□□□ 0.44
COLCA1Q6ZS62 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 AC007322.4-201ENST00000509611 723 ntBASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 MFSD11-216ENST00000590393 1141 ntBASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
COLCA1Q6ZS62 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 AC016769.1-201ENST00000409132 1010 ntBASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 AC007322.3-201ENST00000426526 701 ntBASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 AL162412.1-201ENST00000567129 965 ntBASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 FEM1AP1-201ENST00000431297 1995 ntBASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
COLCA1Q6ZS62 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
COLCA1Q6ZS62 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms