Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 MIR935-201ENST00000401179 91 ntBASIC18.79■□□□□ 0.6
NIPAL3Q6P499 AC034268.1-201ENST00000441047 882 ntBASIC18.79■□□□□ 0.6
NIPAL3Q6P499 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 DUX4L2-201ENST00000561772 1275 ntBASIC18.79■□□□□ 0.6
NIPAL3Q6P499 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 DUX4L6-201ENST00000626483 1275 ntBASIC18.79■□□□□ 0.6
NIPAL3Q6P499 DUX4L1-201ENST00000627662 1275 ntBASIC18.79■□□□□ 0.6
NIPAL3Q6P499 DUX4L8-201ENST00000629013 1275 ntBASIC18.79■□□□□ 0.6
NIPAL3Q6P499 DUX4L3-201ENST00000630187 1275 ntBASIC18.79■□□□□ 0.6
NIPAL3Q6P499 DUX4L7-201ENST00000630678 1275 ntBASIC18.79■□□□□ 0.6
NIPAL3Q6P499 DUX4L5-201ENST00000630834 1275 ntBASIC18.79■□□□□ 0.6
NIPAL3Q6P499 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NIPAL3Q6P499 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 AC026271.2-201ENST00000428091 497 ntBASIC18.78■□□□□ 0.6
NIPAL3Q6P499 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.78■□□□□ 0.6
NIPAL3Q6P499 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
NIPAL3Q6P499 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NIPAL3Q6P499 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.77■□□□□ 0.59
NIPAL3Q6P499 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
NIPAL3Q6P499 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.77■□□□□ 0.59
NIPAL3Q6P499 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
NIPAL3Q6P499 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NIPAL3Q6P499 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 EEF1DP3-203ENST00000566025 782 ntBASIC18.76■□□□□ 0.59
NIPAL3Q6P499 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
NIPAL3Q6P499 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NIPAL3Q6P499 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NIPAL3Q6P499 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms