Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 CNN2P6-201ENST00000439038 900 ntBASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 AC245052.3-201ENST00000450182 901 ntBASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.52■■□□□ 1.04
TTC39BQ5VTQ0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TTC39BQ5VTQ0 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 AC006970.2-201ENST00000450065 779 ntBASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TTC39BQ5VTQ0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 SLC25A24-204ENST00000569674 2357 ntBASIC21.5■■□□□ 1.03
TTC39BQ5VTQ0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 MIR663A-201ENST00000385250 93 ntBASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 CROCCP5-201ENST00000436658 830 ntBASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 AC005181.1-201ENST00000604782 1256 ntBASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 MAZ-216ENST00000616501 991 ntTSL 5 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
TTC39BQ5VTQ0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.48■■□□□ 1.03
TTC39BQ5VTQ0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.48■■□□□ 1.03
TTC39BQ5VTQ0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39BQ5VTQ0 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.48■■□□□ 1.03
TTC39BQ5VTQ0 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.48■■□□□ 1.03
TTC39BQ5VTQ0 AL162412.1-201ENST00000567129 965 ntBASIC21.48■■□□□ 1.03
TTC39BQ5VTQ0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39BQ5VTQ0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39BQ5VTQ0 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39BQ5VTQ0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39BQ5VTQ0 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39BQ5VTQ0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TTC39BQ5VTQ0 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.47■■□□□ 1.03
TTC39BQ5VTQ0 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms