Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SGO1Q5FBB7 FEM1AP1-201ENST00000431297 1995 ntBASIC20.04■□□□□ 0.8
SGO1Q5FBB7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 AC027612.3-201ENST00000413684 1047 ntBASIC20.04■□□□□ 0.8
SGO1Q5FBB7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 AIRN-201ENST00000601203 4374 ntBASIC20.04■□□□□ 0.8
SGO1Q5FBB7 LINC02228-203ENST00000641970 1355 ntBASIC20.04■□□□□ 0.8
SGO1Q5FBB7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SGO1Q5FBB7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 AC008175.2-201ENST00000612840 297 ntBASIC20.03■□□□□ 0.8
SGO1Q5FBB7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SGO1Q5FBB7 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SGO1Q5FBB7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SGO1Q5FBB7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SGO1Q5FBB7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SGO1Q5FBB7 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SGO1Q5FBB7 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.02■□□□□ 0.8
SGO1Q5FBB7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.02■□□□□ 0.8
SGO1Q5FBB7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.02■□□□□ 0.8
SGO1Q5FBB7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SGO1Q5FBB7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SGO1Q5FBB7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SGO1Q5FBB7 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SGO1Q5FBB7 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SGO1Q5FBB7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SGO1Q5FBB7 LINC01521-201ENST00000504184 1943 ntBASIC20.02■□□□□ 0.79
SGO1Q5FBB7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SGO1Q5FBB7 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SGO1Q5FBB7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20■□□□□ 0.79
SGO1Q5FBB7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SGO1Q5FBB7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SGO1Q5FBB7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SGO1Q5FBB7 SLC25A24-204ENST00000569674 2357 ntBASIC20■□□□□ 0.79
SGO1Q5FBB7 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20■□□□□ 0.79
SGO1Q5FBB7 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20■□□□□ 0.79
SGO1Q5FBB7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20■□□□□ 0.79
SGO1Q5FBB7 ZNRF2P3-201ENST00000424200 374 ntBASIC20■□□□□ 0.79
SGO1Q5FBB7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20■□□□□ 0.79
SGO1Q5FBB7 SP2-202ENST00000613139 908 ntTSL 5 BASIC20■□□□□ 0.79
SGO1Q5FBB7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SGO1Q5FBB7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SGO1Q5FBB7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SGO1Q5FBB7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SGO1Q5FBB7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20■□□□□ 0.79
SGO1Q5FBB7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SGO1Q5FBB7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
SGO1Q5FBB7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 511.4 ms