Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ELP2-204ENST00000423854 2385 ntTSL 1 (best) BASIC9.99□□□□□ -0.812e-6■■■□□ 16.1
SRSF1Q07955 ELP2-202ENST00000351393 2453 ntTSL 2 BASIC9.25□□□□□ -0.932e-6■■■□□ 16.1
SRSF1Q07955 ELP2-201ENST00000350494 2487 ntTSL 2 BASIC9.02□□□□□ -0.972e-6■■■□□ 16.1
SRSF1Q07955 ELP2-210ENST00000539560 2542 ntTSL 1 (best)8.14□□□□□ -1.112e-6■■■□□ 16.1
SRSF1Q07955 ELP2-203ENST00000358232 8459 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.122e-6■■■□□ 16.1
SRSF1Q07955 ELP2-205ENST00000442325 2722 ntTSL 2 BASIC7.43□□□□□ -1.222e-6■■■□□ 16.1
SRSF1Q07955 NUP85-201ENST00000245544 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.677e-7■■■□□ 16.1
SRSF1Q07955 NUP85-211ENST00000579324 2010 ntTSL 2 BASIC8.83□□□□□ -17e-7■■■□□ 16.1
SRSF1Q07955 NUP85-216ENST00000581104 2233 ntTSL 28.34□□□□□ -1.077e-7■■■□□ 16.1
SRSF1Q07955 NUP85-210ENST00000579298 1890 ntTSL 5 BASIC7.92□□□□□ -1.147e-7■■■□□ 16.1
SRSF1Q07955 STXBP2-220ENST00000601061 706 ntTSL 319.09■□□□□ 0.652e-8■■■□□ 16.1
SRSF1Q07955 STXBP2-208ENST00000595800 1974 ntTSL 216.64■□□□□ 0.252e-8■■■□□ 16.1
SRSF1Q07955 STXBP2-214ENST00000599400 811 ntTSL 514.63□□□□□ -0.072e-8■■■□□ 16.1
SRSF1Q07955 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.17□□□□□ -0.142e-8■■■□□ 16.1
SRSF1Q07955 TTLL3-220ENST00000452823 579 ntTSL 38.4□□□□□ -1.061e-10■■■□□ 16.1
SRSF1Q07955 STXBP2-219ENST00000600702 770 ntTSL 213.17□□□□□ -0.31e-8■■■□□ 16.1
SRSF1Q07955 CENPT-223ENST00000566758 858 ntTSL 514.93□□□□□ -0.022e-7■■■□□ 16.1
SRSF1Q07955 CENPT-211ENST00000564128 2673 ntTSL 211.53□□□□□ -0.562e-7■■■□□ 16.1
SRSF1Q07955 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.59■□□□□ 0.253e-12■■■□□ 16.1
SRSF1Q07955 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.19■□□□□ 0.182e-6■■■□□ 16.1
SRSF1Q07955 ZSWIM8-204ENST00000431225 1687 ntTSL 515.79■□□□□ 0.122e-6■■■□□ 16.1
SRSF1Q07955 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.092e-6■■■□□ 16.1
SRSF1Q07955 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.39□□□□□ -0.112e-6■■■□□ 16.1
SRSF1Q07955 ZSWIM8-205ENST00000433366 5773 ntTSL 513.86□□□□□ -0.192e-6■■■□□ 16.1
SRSF1Q07955 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.12□□□□□ -0.312e-6■■■□□ 16.1
SRSF1Q07955 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.492e-6■■■□□ 16.1
SRSF1Q07955 ZSWIM8-212ENST00000492395 4490 ntTSL 1 (best)9.93□□□□□ -0.822e-6■■■□□ 16.1
SRSF1Q07955 CREBZF-207ENST00000528889 745 ntTSL 36.14□□□□□ -1.437e-12■■■□□ 16.1
SRSF1Q07955 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.51e-7■■■□□ 16.1
SRSF1Q07955 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.12■□□□□ 0.655e-9■■■□□ 16.1
SRSF1Q07955 INTS11-223ENST00000498173 1589 ntTSL 218.93■□□□□ 0.625e-9■■■□□ 16.1
SRSF1Q07955 INTS11-220ENST00000493534 896 ntTSL 318.38■□□□□ 0.535e-9■■■□□ 16.1
SRSF1Q07955 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.9■□□□□ 0.465e-9■■■□□ 16.1
SRSF1Q07955 INTS11-230ENST00000526332 579 ntTSL 417.16■□□□□ 0.345e-9■■■□□ 16.1
SRSF1Q07955 INTS11-242ENST00000531377 816 ntTSL 517.05■□□□□ 0.325e-9■■■□□ 16.1
SRSF1Q07955 INTS11-235ENST00000527719 750 ntTSL 517.05■□□□□ 0.325e-9■■■□□ 16.1
SRSF1Q07955 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC16.82■□□□□ 0.285e-9■■■□□ 16.1
SRSF1Q07955 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.34■□□□□ 0.215e-9■■■□□ 16.1
SRSF1Q07955 INTS11-206ENST00000430786 849 ntTSL 516.3■□□□□ 0.25e-9■■■□□ 16.1
SRSF1Q07955 INTS11-207ENST00000434694 1056 ntTSL 516.28■□□□□ 0.25e-9■■■□□ 16.1
SRSF1Q07955 INTS11-218ENST00000488042 1134 ntTSL 215.94■□□□□ 0.145e-9■■■□□ 16.1
SRSF1Q07955 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.83■□□□□ 0.125e-9■■■□□ 16.1
SRSF1Q07955 INTS11-232ENST00000526904 551 ntTSL 415.72■□□□□ 0.115e-9■■■□□ 16.1
SRSF1Q07955 INTS11-237ENST00000530031 800 ntTSL 515.59■□□□□ 0.095e-9■■■□□ 16.1
SRSF1Q07955 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.085e-9■■■□□ 16.1
SRSF1Q07955 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.49■□□□□ 0.075e-9■■■□□ 16.1
SRSF1Q07955 INTS11-236ENST00000528879 1524 ntTSL 514.81□□□□□ -0.045e-9■■■□□ 16.1
SRSF1Q07955 INTS11-221ENST00000496353 2428 ntTSL 214.29□□□□□ -0.125e-9■■■□□ 16.1
SRSF1Q07955 INTS11-227ENST00000525603 738 ntTSL 314.04□□□□□ -0.165e-9■■■□□ 16.1
SRSF1Q07955 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.89□□□□□ -0.195e-9■■■□□ 16.1
SRSF1Q07955 INTS11-231ENST00000526797 659 ntTSL 413.38□□□□□ -0.275e-9■■■□□ 16.1
SRSF1Q07955 INTS11-243ENST00000532772 1618 ntTSL 513.29□□□□□ -0.285e-9■■■□□ 16.1
SRSF1Q07955 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.84□□□□□ -0.355e-9■■■□□ 16.1
SRSF1Q07955 INTS11-229ENST00000526113 591 ntTSL 512.82□□□□□ -0.365e-9■■■□□ 16.1
SRSF1Q07955 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.45e-9■■■□□ 16.1
SRSF1Q07955 INTS11-233ENST00000527098 2004 ntTSL 212.57□□□□□ -0.45e-9■■■□□ 16.1
SRSF1Q07955 INTS11-210ENST00000458452 2571 ntTSL 212.37□□□□□ -0.435e-9■■■□□ 16.1
SRSF1Q07955 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.35□□□□□ -0.435e-9■■■□□ 16.1
SRSF1Q07955 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.34□□□□□ -0.435e-9■■■□□ 16.1
SRSF1Q07955 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.13□□□□□ -0.475e-9■■■□□ 16.1
SRSF1Q07955 INTS11-201ENST00000323275 2450 ntTSL 1 (best)12.1□□□□□ -0.475e-9■■■□□ 16.1
SRSF1Q07955 INSIG1-206ENST00000476756 1320 ntTSL 210.82□□□□□ -0.685e-9■■■□□ 16.1
SRSF1Q07955 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.143e-6■■■□□ 16.1
SRSF1Q07955 RER1-205ENST00000443438 540 ntTSL 26.96□□□□□ -1.32e-17■■■□□ 16.1
SRSF1Q07955 INSIG1-205ENST00000468307 852 ntTSL 54.78□□□□□ -1.645e-9■■■□□ 16.1
SRSF1Q07955 AC005726.2-201ENST00000481916 2091 ntTSL 1 (best)16.46■□□□□ 0.221e-6■■■□□ 16.1
SRSF1Q07955 SPAG5-201ENST00000321765 4040 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.891e-6■■■□□ 16.1
SRSF1Q07955 WDR27-209ENST00000486490 492 ntTSL 511.56□□□□□ -0.565e-9■■■□□ 16.1
SRSF1Q07955 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.596e-7■■■□□ 16.1
SRSF1Q07955 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.846e-7■■■□□ 16.1
SRSF1Q07955 WDR27-211ENST00000546525 3511 ntTSL 1 (best)9.23□□□□□ -0.936e-7■■■□□ 16.1
SRSF1Q07955 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.742e-7■■■□□ 16.1
SRSF1Q07955 FANCA-230ENST00000568369 4601 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.022e-7■■■□□ 16.1
SRSF1Q07955 EXOC3L4-205ENST00000560102 563 ntTSL 319.95■□□□□ 0.781e-6■■■□□ 16.1
SRSF1Q07955 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.877e-7■■■□□ 16.1
SRSF1Q07955 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.23□□□□□ -2.217e-7■■■□□ 16.1
SRSF1Q07955 CIAO1-202ENST00000469320 565 ntTSL 418.86■□□□□ 0.614e-6■■■□□ 16
SRSF1Q07955 CIAO1-204ENST00000491394 748 ntTSL 216.26■□□□□ 0.194e-6■■■□□ 16
SRSF1Q07955 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.044e-6■■■□□ 16
SRSF1Q07955 CIAO1-201ENST00000272402 3588 ntTSL 29.09□□□□□ -0.954e-6■■■□□ 16
SRSF1Q07955 CLUH-207ENST00000573641 581 ntTSL 319.21■□□□□ 0.674e-18■■■□□ 16
SRSF1Q07955 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.074e-18■■■□□ 16
SRSF1Q07955 CLUH-211ENST00000575014 4959 ntAPPRIS ALT2 TSL 514.19□□□□□ -0.144e-18■■■□□ 16
SRSF1Q07955 CLUH-208ENST00000574166 585 ntTSL 413.49□□□□□ -0.254e-18■■■□□ 16
SRSF1Q07955 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.274e-18■■■□□ 16
SRSF1Q07955 CLUH-210ENST00000574426 3844 ntAPPRIS ALT2 TSL 511.56□□□□□ -0.564e-18■■■□□ 16
SRSF1Q07955 SRRM1-222ENST00000596378 2314 ntTSL 1 (best)17.17■□□□□ 0.347e-9■■■□□ 16
SRSF1Q07955 SRRM1-207ENST00000468822 768 ntTSL 215.71■□□□□ 0.117e-9■■■□□ 16
SRSF1Q07955 SRRM1-223ENST00000600523 575 ntTSL 511.72□□□□□ -0.537e-9■■■□□ 16
SRSF1Q07955 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.757e-9■■■□□ 16
SRSF1Q07955 SRRM1-221ENST00000593639 563 ntTSL 59.6□□□□□ -0.877e-9■■■□□ 16
SRSF1Q07955 SRRM1-205ENST00000462710 2624 ntTSL 59.36□□□□□ -0.917e-9■■■□□ 16
SRSF1Q07955 SRRM1-217ENST00000490543 673 ntTSL 59.26□□□□□ -0.937e-9■■■□□ 16
SRSF1Q07955 SRRM1-212ENST00000479034 2671 ntTSL 56.28□□□□□ -1.47e-9■■■□□ 16
SRSF1Q07955 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.757e-9■■■□□ 16
SRSF1Q07955 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.777e-9■■■□□ 16
SRSF1Q07955 SRRM1-211ENST00000478890 480 ntTSL 31.66□□□□□ -2.147e-9■■■□□ 16
SRSF1Q07955 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.597e-8■■■□□ 16
SRSF1Q07955 CCAR1-210ENST00000539250 701 ntTSL 26.24□□□□□ -1.412e-9■■■□□ 16
SRSF1Q07955 PPP1R15A-202ENST00000600406 1725 nt12.19□□□□□ -0.462e-8■■■□□ 16
Retrieved 100 of 14,836 protein–RNA pairs in 58.1 ms