Protein–RNA interactions for Protein: Q01477

UBP3, Ubiquitin carboxyl-terminal hydrolase 3, yeastyeast

Known RBP RIP-Chip data

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP3Q01477 MIC19YFR011C 513 nt4.12□□□□□ -1.75
UBP3Q01477 VEL1YGL258W 621 nt4.12□□□□□ -1.75
UBP3Q01477 UBC7YMR022W 498 nt4.12□□□□□ -1.75
UBP3Q01477 ERP4YOR016C 624 nt4.12□□□□□ -1.75
UBP3Q01477 YPR010C-AYPR010C-A 219 nt4.12□□□□□ -1.75
UBP3Q01477 GAC1YOR178C 2382 nt4.12□□□□□ -1.75 RIP-Chip
UBP3Q01477 VAC8YEL013W 1737 nt4.12□□□□□ -1.75
UBP3Q01477 UBP5YER144C 2418 nt4.12□□□□□ -1.75
UBP3Q01477 RPO21YDL140C 5202 nt4.11□□□□□ -1.75
UBP3Q01477 GSC2YGR032W 5688 nt4.11□□□□□ -1.75 RIP-Chip
UBP3Q01477 AAD3YCR107W 1092 nt4.11□□□□□ -1.75
UBP3Q01477 YDL009CYDL009C 324 nt4.11□□□□□ -1.75
UBP3Q01477 YGL007C-AYGL007C-A 87 nt4.11□□□□□ -1.75
UBP3Q01477 JLP2YMR132C 627 nt4.11□□□□□ -1.75 RIP-Chip
UBP3Q01477 SKN7YHR206W 1869 nt4.11□□□□□ -1.75 RIP-Chip
UBP3Q01477 STP2YHR006W 1626 nt4.1□□□□□ -1.75
UBP3Q01477 YPR003CYPR003C 2265 nt4.1□□□□□ -1.75
UBP3Q01477 REG1YDR028C 3045 nt4.1□□□□□ -1.75
UBP3Q01477 RTT105YER104W 627 nt4.1□□□□□ -1.75
UBP3Q01477 ECO1YFR027W 846 nt4.1□□□□□ -1.75
UBP3Q01477 CDC26YFR036W 375 nt4.1□□□□□ -1.75
UBP3Q01477 TCD1YHR003C 1290 nt4.1□□□□□ -1.75
UBP3Q01477 BCD1YHR040W 1101 nt4.1□□□□□ -1.75
UBP3Q01477 YIL046W-AYIL046W-A 165 nt4.1□□□□□ -1.75
UBP3Q01477 YMR290W-AYMR290W-A 348 nt4.1□□□□□ -1.75
UBP3Q01477 YPR077CYPR077C 372 nt4.1□□□□□ -1.75
UBP3Q01477 BYE1YKL005C 1785 nt4.09□□□□□ -1.75
UBP3Q01477 SEC15YGL233W 2733 nt4.09□□□□□ -1.75
UBP3Q01477 MUS81YDR386W 1899 nt4.09□□□□□ -1.75 RIP-Chip
UBP3Q01477 SCY1YGL083W 2415 nt4.09□□□□□ -1.75 RIP-Chip
UBP3Q01477 OPI6YDL096C 327 nt4.09□□□□□ -1.75
UBP3Q01477 YAL037WYAL037W 804 nt4.09□□□□□ -1.75 RIP-Chip
UBP3Q01477 YKL162C-AYKL162C-A 153 nt4.09□□□□□ -1.75
UBP3Q01477 MRPL50YNR022C 420 nt4.09□□□□□ -1.75
UBP3Q01477 SWT1YOR166C 1377 nt4.09□□□□□ -1.75
UBP3Q01477 YJL132WYJL132W 2253 nt4.09□□□□□ -1.76 RIP-Chip
UBP3Q01477 MSH4YFL003C 2637 nt4.08□□□□□ -1.76
UBP3Q01477 VBA4YDR119W 2307 nt4.08□□□□□ -1.76
UBP3Q01477 YDR194W-AYDR194W-A 153 nt4.08□□□□□ -1.76
UBP3Q01477 tM(CAU)Q1tM(CAU)Q1 76 nt4.08□□□□□ -1.76
UBP3Q01477 YGR053CYGR053C 852 nt4.08□□□□□ -1.76 RIP-Chip
UBP3Q01477 OTU2YHL013C 924 nt4.08□□□□□ -1.76
UBP3Q01477 YLR294CYLR294C 330 nt4.08□□□□□ -1.76
UBP3Q01477 ICY1YMR195W 384 nt4.08□□□□□ -1.76
UBP3Q01477 VTI1YMR197C 654 nt4.08□□□□□ -1.76
UBP3Q01477 HHF2YNL030W 312 nt4.08□□□□□ -1.76
UBP3Q01477 KRI1YNL308C 1776 nt4.08□□□□□ -1.76 RIP-Chip
UBP3Q01477 RSM19YNR037C 276 nt4.08□□□□□ -1.76
UBP3Q01477 RRD2YPL152W 1077 nt4.08□□□□□ -1.76
UBP3Q01477 DBF20YPR111W 1695 nt4.07□□□□□ -1.76 RIP-Chip
UBP3Q01477 PWP2YCR057C 2772 nt4.07□□□□□ -1.76
UBP3Q01477 YAL031W-AYAL031W-A 309 nt4.07□□□□□ -1.76
UBP3Q01477 ADI1YMR009W 540 nt4.07□□□□□ -1.76
UBP3Q01477 MCM7YBR202W 2538 nt4.07□□□□□ -1.76
UBP3Q01477 EAP1YKL204W 1899 nt4.07□□□□□ -1.76
UBP3Q01477 TCB3YML072C 4638 nt4.06□□□□□ -1.76
UBP3Q01477 UTP15YMR093W 1542 nt4.06□□□□□ -1.76
UBP3Q01477 JIP5YPR169W 1479 nt4.06□□□□□ -1.76 RIP-Chip
UBP3Q01477 GYL1YMR192W 2163 nt4.06□□□□□ -1.76
UBP3Q01477 URB2YJR041C 3525 nt4.06□□□□□ -1.76
UBP3Q01477 RPS8BYER102W 603 nt4.06□□□□□ -1.76
UBP3Q01477 YGL152CYGL152C 678 nt4.06□□□□□ -1.76
UBP3Q01477 YHL026CYHL026C 948 nt4.06□□□□□ -1.76
UBP3Q01477 YMR316C-AYMR316C-A 312 nt4.06□□□□□ -1.76
UBP3Q01477 YOP1YPR028W 543 nt4.06□□□□□ -1.76
UBP3Q01477 CBP2YHL038C 1893 nt4.06□□□□□ -1.76
UBP3Q01477 ETP1YHL010C 1758 nt4.06□□□□□ -1.76
UBP3Q01477 RPO31YOR116C 4383 nt4.06□□□□□ -1.76 RIP-Chip
UBP3Q01477 PPZ1YML016C 2079 nt4.06□□□□□ -1.76
UBP3Q01477 CWH41YGL027C 2502 nt4.05□□□□□ -1.76
UBP3Q01477 VOA1YGR106C 798 nt4.05□□□□□ -1.76
UBP3Q01477 YMR320WYMR320W 306 nt4.05□□□□□ -1.76
UBP3Q01477 YNL146C-AYNL146C-A 195 nt4.05□□□□□ -1.76
UBP3Q01477 ZEO1YOL109W 342 nt4.05□□□□□ -1.76
UBP3Q01477 YPL276WYPL276W 438 nt4.05□□□□□ -1.76
UBP3Q01477 MSD1YPL104W 1977 nt4.05□□□□□ -1.76 RIP-Chip
UBP3Q01477 KAR9YPL269W 1935 nt4.05□□□□□ -1.76
UBP3Q01477 FAT1YBR041W 2010 nt4.04□□□□□ -1.76
UBP3Q01477 YDR090CYDR090C 933 nt4.04□□□□□ -1.76
UBP3Q01477 YDR102CYDR102C 333 nt4.04□□□□□ -1.76
UBP3Q01477 Q0092Q0092 141 nt4.04□□□□□ -1.76
UBP3Q01477 LAG1YHL003C 1236 nt4.04□□□□□ -1.76
UBP3Q01477 GEP4YHR100C 558 nt4.04□□□□□ -1.76
UBP3Q01477 RMP1YLR145W 606 nt4.04□□□□□ -1.76
UBP3Q01477 RAD14YMR201C 1116 nt4.04□□□□□ -1.76
UBP3Q01477 PEX17YNL214W 600 nt4.04□□□□□ -1.76
UBP3Q01477 JEN1YKL217W 1851 nt4.04□□□□□ -1.76
UBP3Q01477 HOP1YIL072W 1818 nt4.04□□□□□ -1.76
UBP3Q01477 YDR338CYDR338C 2088 nt4.04□□□□□ -1.76
UBP3Q01477 ZDS2YML109W 2829 nt4.03□□□□□ -1.76 RIP-Chip
UBP3Q01477 ECM16YMR128W 3804 nt4.03□□□□□ -1.76
UBP3Q01477 YDR133CYDR133C 336 nt4.03□□□□□ -1.76
UBP3Q01477 RPS23AYGR118W 438 nt4.03□□□□□ -1.76
UBP3Q01477 RPS23BYPR132W 438 nt4.03□□□□□ -1.76 RIP-Chip
UBP3Q01477 RPN2YIL075C 2838 nt4.02□□□□□ -1.77
UBP3Q01477 YDR526CYDR526C 471 nt4.02□□□□□ -1.77
UBP3Q01477 YGR107WYGR107W 450 nt4.02□□□□□ -1.77
UBP3Q01477 YOR192C-CYOR192C-C 237 nt4.02□□□□□ -1.77
UBP3Q01477 YCG1YDR325W 3108 nt4.02□□□□□ -1.77
UBP3Q01477 MLH2YLR035C 2088 nt4.02□□□□□ -1.77
Retrieved 100 of 7,029 protein–RNA pairs in 54.8 ms