Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SIRPAP78324 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIRPAP78324 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIRPAP78324 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SIRPAP78324 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIRPAP78324 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.81■□□□□ 0.6
SIRPAP78324 AC006970.2-201ENST00000450065 779 ntBASIC18.81■□□□□ 0.6
SIRPAP78324 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIRPAP78324 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.81■□□□□ 0.6
SIRPAP78324 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.81■□□□□ 0.6
SIRPAP78324 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.81■□□□□ 0.6
SIRPAP78324 AC053503.5-201ENST00000601508 636 ntBASIC18.81■□□□□ 0.6
SIRPAP78324 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.81■□□□□ 0.6
SIRPAP78324 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIRPAP78324 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIRPAP78324 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SIRPAP78324 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.8■□□□□ 0.6
SIRPAP78324 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.8■□□□□ 0.6
SIRPAP78324 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SIRPAP78324 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.8■□□□□ 0.6
SIRPAP78324 RAP2CP1-201ENST00000605103 478 ntBASIC18.8■□□□□ 0.6
SIRPAP78324 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.8■□□□□ 0.6
SIRPAP78324 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SIRPAP78324 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SIRPAP78324 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.79■□□□□ 0.6
SIRPAP78324 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.79■□□□□ 0.6
SIRPAP78324 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.79■□□□□ 0.6
SIRPAP78324 ID1-201ENST00000376105 1233 ntBASIC18.79■□□□□ 0.6
SIRPAP78324 MIR663A-201ENST00000385250 93 ntBASIC18.79■□□□□ 0.6
SIRPAP78324 METTL26-203ENST00000397664 604 ntTSL 2 BASIC18.79■□□□□ 0.6
SIRPAP78324 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.79■□□□□ 0.6
SIRPAP78324 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.79■□□□□ 0.6
SIRPAP78324 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.79■□□□□ 0.6
SIRPAP78324 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC18.79■□□□□ 0.6
SIRPAP78324 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SIRPAP78324 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
SIRPAP78324 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
SIRPAP78324 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SIRPAP78324 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.79■□□□□ 0.6
SIRPAP78324 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SIRPAP78324 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SIRPAP78324 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.78■□□□□ 0.6
SIRPAP78324 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPAP78324 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.78■□□□□ 0.6
SIRPAP78324 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPAP78324 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPAP78324 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
SIRPAP78324 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPAP78324 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SIRPAP78324 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPAP78324 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPAP78324 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPAP78324 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPAP78324 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.78■□□□□ 0.6
SIRPAP78324 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.78■□□□□ 0.6
SIRPAP78324 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.78■□□□□ 0.6
SIRPAP78324 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.78■□□□□ 0.6
SIRPAP78324 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.78■□□□□ 0.6
SIRPAP78324 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.78■□□□□ 0.6
SIRPAP78324 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.78■□□□□ 0.6
SIRPAP78324 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.78■□□□□ 0.6
SIRPAP78324 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPAP78324 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPAP78324 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPAP78324 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.78■□□□□ 0.6
SIRPAP78324 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SIRPAP78324 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SIRPAP78324 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SIRPAP78324 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms