Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
DEFA3P59666 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DEFA3P59666 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DEFA3P59666 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DEFA3P59666 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC18.18■□□□□ 0.5
DEFA3P59666 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC18.18■□□□□ 0.5
DEFA3P59666 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
DEFA3P59666 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
DEFA3P59666 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
DEFA3P59666 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DEFA3P59666 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.18■□□□□ 0.5
DEFA3P59666 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
DEFA3P59666 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.17■□□□□ 0.5
DEFA3P59666 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.17■□□□□ 0.5
DEFA3P59666 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.17■□□□□ 0.5
DEFA3P59666 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
DEFA3P59666 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
DEFA3P59666 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC18.17■□□□□ 0.5
DEFA3P59666 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.17■□□□□ 0.5
DEFA3P59666 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
DEFA3P59666 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
DEFA3P59666 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
DEFA3P59666 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
DEFA3P59666 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
DEFA3P59666 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.16■□□□□ 0.5
DEFA3P59666 AL512408.1-201ENST00000569378 2000 ntBASIC18.16■□□□□ 0.5
DEFA3P59666 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DEFA3P59666 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DEFA3P59666 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DEFA3P59666 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DEFA3P59666 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DEFA3P59666 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
DEFA3P59666 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DEFA3P59666 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DEFA3P59666 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DEFA3P59666 AC004448.1-201ENST00000458332 883 ntBASIC18.16■□□□□ 0.5
DEFA3P59666 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
DEFA3P59666 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DEFA3P59666 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DEFA3P59666 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DEFA3P59666 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DEFA3P59666 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
DEFA3P59666 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
DEFA3P59666 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DEFA3P59666 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DEFA3P59666 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
DEFA3P59666 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
DEFA3P59666 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.15■□□□□ 0.5
DEFA3P59666 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DEFA3P59666 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
DEFA3P59666 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
DEFA3P59666 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.15■□□□□ 0.5
DEFA3P59666 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DEFA3P59666 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DEFA3P59666 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC18.15■□□□□ 0.5
DEFA3P59666 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
DEFA3P59666 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
DEFA3P59666 AC004687.1-201ENST00000579003 1625 ntBASIC18.15■□□□□ 0.5
DEFA3P59666 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
DEFA3P59666 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DEFA3P59666 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DEFA3P59666 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DEFA3P59666 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.14■□□□□ 0.5
DEFA3P59666 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
DEFA3P59666 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.14■□□□□ 0.5
DEFA3P59666 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.14■□□□□ 0.5
DEFA3P59666 AC007225.1-201ENST00000566331 1836 ntBASIC18.14■□□□□ 0.5
DEFA3P59666 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
DEFA3P59666 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
DEFA3P59666 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DEFA3P59666 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
DEFA3P59666 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.14■□□□□ 0.49
DEFA3P59666 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.14■□□□□ 0.49
DEFA3P59666 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.14■□□□□ 0.49
DEFA3P59666 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
DEFA3P59666 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.14■□□□□ 0.49
DEFA3P59666 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DEFA3P59666 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DEFA3P59666 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DEFA3P59666 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.14■□□□□ 0.49
DEFA3P59666 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.14■□□□□ 0.49
DEFA3P59666 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.14■□□□□ 0.49
DEFA3P59666 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DEFA3P59666 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DEFA3P59666 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.14■□□□□ 0.49
DEFA3P59666 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.14■□□□□ 0.49
DEFA3P59666 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms