Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDH11P55287 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH11P55287 AP005212.1-201ENST00000581547 1997 ntBASIC18.88■□□□□ 0.61
CDH11P55287 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH11P55287 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
CDH11P55287 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH11P55287 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH11P55287 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
CDH11P55287 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH11P55287 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC18.88■□□□□ 0.61
CDH11P55287 KRT18P5-201ENST00000436075 1291 ntBASIC18.88■□□□□ 0.61
CDH11P55287 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDH11P55287 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.88■□□□□ 0.61
CDH11P55287 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH11P55287 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.88■□□□□ 0.61
CDH11P55287 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CDH11P55287 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.88■□□□□ 0.61
CDH11P55287 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH11P55287 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDH11P55287 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH11P55287 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.88■□□□□ 0.61
CDH11P55287 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH11P55287 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH11P55287 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDH11P55287 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH11P55287 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH11P55287 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH11P55287 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH11P55287 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH11P55287 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH11P55287 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CDH11P55287 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH11P55287 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH11P55287 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH11P55287 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CDH11P55287 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.87■□□□□ 0.61
CDH11P55287 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH11P55287 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.87■□□□□ 0.61
CDH11P55287 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CDH11P55287 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH11P55287 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH11P55287 AC073314.1-201ENST00000568729 2216 ntBASIC18.86■□□□□ 0.61
CDH11P55287 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH11P55287 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH11P55287 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH11P55287 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH11P55287 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CDH11P55287 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH11P55287 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH11P55287 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH11P55287 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH11P55287 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH11P55287 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CDH11P55287 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
CDH11P55287 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CDH11P55287 KRT18P14-201ENST00000534205 1250 ntBASIC18.86■□□□□ 0.61
CDH11P55287 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.86■□□□□ 0.61
CDH11P55287 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
CDH11P55287 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CDH11P55287 PLK5-205ENST00000642079 1969 ntBASIC18.86■□□□□ 0.61
CDH11P55287 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH11P55287 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.86■□□□□ 0.61
CDH11P55287 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.86■□□□□ 0.61
CDH11P55287 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.86■□□□□ 0.61
CDH11P55287 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CDH11P55287 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH11P55287 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH11P55287 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH11P55287 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH11P55287 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH11P55287 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH11P55287 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH11P55287 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CDH11P55287 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH11P55287 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH11P55287 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH11P55287 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH11P55287 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
CDH11P55287 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.85■□□□□ 0.61
CDH11P55287 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CDH11P55287 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CDH11P55287 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH11P55287 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH11P55287 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH11P55287 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CDH11P55287 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CDH11P55287 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH11P55287 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
CDH11P55287 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.84■□□□□ 0.61
CDH11P55287 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH11P55287 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CDH11P55287 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDH11P55287 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CDH11P55287 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.84■□□□□ 0.61
CDH11P55287 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH11P55287 TERF1P2-201ENST00000583350 1212 ntBASIC18.84■□□□□ 0.61
CDH11P55287 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.84■□□□□ 0.61
CDH11P55287 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CDH11P55287 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CDH11P55287 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms