Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 COG3YER157W 2406 nt1.61□□□□□ -2.15
LSM1P47017 SSF1YHR066W 1362 nt1.61□□□□□ -2.15
LSM1P47017 YCR108CYCR108C 192 nt1.61□□□□□ -2.15
LSM1P47017 YDL026WYDL026W 312 nt1.61□□□□□ -2.15
LSM1P47017 AI3Q0060 1248 nt1.61□□□□□ -2.15
LSM1P47017 GLC7YER133W 939 nt1.61□□□□□ -2.15
LSM1P47017 SYM1YLR251W 594 nt1.61□□□□□ -2.15
LSM1P47017 CCW14YLR390W-A 717 nt1.61□□□□□ -2.15
LSM1P47017 RAD10YML095C 633 nt1.61□□□□□ -2.15
LSM1P47017 YMR144WYMR144W 1029 nt1.61□□□□□ -2.15
LSM1P47017 CTL1YMR180C 963 nt1.61□□□□□ -2.15
LSM1P47017 MRPL44YMR225C 297 nt1.61□□□□□ -2.15
LSM1P47017 MRPL17YNL252C 846 nt1.61□□□□□ -2.15
LSM1P47017 YDR131CYDR131C 1671 nt1.61□□□□□ -2.15
LSM1P47017 SOK2YMR016C 2358 nt1.61□□□□□ -2.15
LSM1P47017 LSM2YBL026W 288 nt1.6□□□□□ -2.15
LSM1P47017 RKM1YPL208W 1752 nt1.59□□□□□ -2.15
LSM1P47017 SLM1YIL105C 2061 nt1.59□□□□□ -2.15
LSM1P47017 YDR018CYDR018C 1191 nt1.59□□□□□ -2.15
LSM1P47017 ADK1YDR226W 669 nt1.59□□□□□ -2.15
LSM1P47017 YIL046W-AYIL046W-A 165 nt1.59□□□□□ -2.15
LSM1P47017 ATP7YKL016C 525 nt1.59□□□□□ -2.15
LSM1P47017 PEP12YOR036W 867 nt1.59□□□□□ -2.15
LSM1P47017 COA2YPL189C-A 207 nt1.59□□□□□ -2.15
LSM1P47017 BAS1YKR099W 2436 nt1.59□□□□□ -2.16
LSM1P47017 YEA4YEL004W 1029 nt1.58□□□□□ -2.16
LSM1P47017 DDI2YFL061W 678 nt1.58□□□□□ -2.16
LSM1P47017 EMP24YGL200C 612 nt1.58□□□□□ -2.16
LSM1P47017 RPL11BYGR085C 525 nt1.58□□□□□ -2.16
LSM1P47017 ARC18YLR370C 537 nt1.58□□□□□ -2.16
LSM1P47017 YNR034W-AYNR034W-A 297 nt1.58□□□□□ -2.16
LSM1P47017 PNO1YOR145C 825 nt1.58□□□□□ -2.16
LSM1P47017 YOR277CYOR277C 309 nt1.58□□□□□ -2.16
LSM1P47017 RPL11AYPR102C 525 nt1.58□□□□□ -2.16
LSM1P47017 snR35snR35 204 nt1.58□□□□□ -2.16
LSM1P47017 YJL016WYJL016W 1686 nt1.58□□□□□ -2.16
LSM1P47017 PEA2YER149C 1263 nt1.57□□□□□ -2.16
LSM1P47017 YHR212CYHR212C 336 nt1.57□□□□□ -2.16
LSM1P47017 NCE101YJL205C 162 nt1.57□□□□□ -2.16
LSM1P47017 YAR060CYAR060C 336 nt1.57□□□□□ -2.16
LSM1P47017 SRP1YNL189W 1629 nt1.57□□□□□ -2.16
LSM1P47017 TFC8YPL007C 1767 nt1.57□□□□□ -2.16
LSM1P47017 NIC96YFR002W 2520 nt1.57□□□□□ -2.16
LSM1P47017 MYO4YAL029C 4416 nt1.56□□□□□ -2.16
LSM1P47017 PRK1YIL095W 2433 nt1.56□□□□□ -2.16
LSM1P47017 YJR039WYJR039W 3366 nt1.56□□□□□ -2.16
LSM1P47017 RPL35BYDL136W 363 nt1.56□□□□□ -2.16
LSM1P47017 PET100YDR079W 336 nt1.56□□□□□ -2.16
LSM1P47017 RPL37BYDR500C 267 nt1.56□□□□□ -2.16
LSM1P47017 YER068C-AYER068C-A 432 nt1.56□□□□□ -2.16
LSM1P47017 YGR109W-AYGR109W-A 873 nt1.56□□□□□ -2.16
LSM1P47017 YHL045WYHL045W 348 nt1.56□□□□□ -2.16
LSM1P47017 YML047W-AYML047W-A 366 nt1.56□□□□□ -2.16
LSM1P47017 DSE1YER124C 1722 nt1.56□□□□□ -2.16
LSM1P47017 STD1YOR047C 1335 nt1.56□□□□□ -2.16
LSM1P47017 CHC1YGL206C 4962 nt1.56□□□□□ -2.16
LSM1P47017 HSL1YKL101W 4557 nt1.56□□□□□ -2.16
LSM1P47017 URK1YNR012W 1506 nt1.56□□□□□ -2.16
LSM1P47017 YGR204C-AYGR204C-A 114 nt1.55□□□□□ -2.16
LSM1P47017 YJL147CYJL147C 1149 nt1.55□□□□□ -2.16
LSM1P47017 YLR311CYLR311C 348 nt1.55□□□□□ -2.16
LSM1P47017 YMR230W-AYMR230W-A 189 nt1.55□□□□□ -2.16
LSM1P47017 YOL107WYOL107W 1029 nt1.55□□□□□ -2.16
LSM1P47017 HRT1YOL133W 366 nt1.55□□□□□ -2.16
LSM1P47017 YOR392WYOR392W 444 nt1.55□□□□□ -2.16
LSM1P47017 YPR074W-AYPR074W-A 171 nt1.55□□□□□ -2.16
LSM1P47017 NAB6YML117W 3405 nt1.55□□□□□ -2.16
LSM1P47017 TDA9YML081W 3756 nt1.55□□□□□ -2.16
LSM1P47017 RPN3YER021W 1572 nt1.55□□□□□ -2.16
LSM1P47017 DAL5YJR152W 1632 nt1.55□□□□□ -2.16
LSM1P47017 DNF3YMR162C 4971 nt1.54□□□□□ -2.16
LSM1P47017 MFA1YDR461W 111 nt1.54□□□□□ -2.16
LSM1P47017 SPC110YDR356W 2835 nt1.53□□□□□ -2.16
LSM1P47017 YGL101WYGL101W 648 nt1.53□□□□□ -2.16
LSM1P47017 AIM18YHR198C 966 nt1.53□□□□□ -2.16
LSM1P47017 YJL133C-AYJL133C-A 225 nt1.53□□□□□ -2.16
LSM1P47017 CAP1YKL007W 807 nt1.53□□□□□ -2.16
LSM1P47017 TPK3YKL166C 1197 nt1.53□□□□□ -2.16
LSM1P47017 TAF4YMR005W 1167 nt1.53□□□□□ -2.16
LSM1P47017 YMR147WYMR147W 672 nt1.53□□□□□ -2.16
LSM1P47017 MPC54YOR177C 1395 nt1.53□□□□□ -2.16
LSM1P47017 YPL238CYPL238C 390 nt1.53□□□□□ -2.16
LSM1P47017 YBR174CYBR174C 315 nt1.53□□□□□ -2.16
LSM1P47017 YOR019WYOR019W 2193 nt1.52□□□□□ -2.17
LSM1P47017 CDC37YDR168W 1521 nt1.52□□□□□ -2.17
LSM1P47017 GAL80YML051W 1308 nt1.52□□□□□ -2.17
LSM1P47017 PAU3YCR104W 375 nt1.52□□□□□ -2.17
LSM1P47017 RMD5YDR255C 1266 nt1.52□□□□□ -2.17
LSM1P47017 PGD1YGL025C 1194 nt1.52□□□□□ -2.17
LSM1P47017 YML090WYML090W 387 nt1.52□□□□□ -2.17
LSM1P47017 YMR272W-BYMR272W-B 108 nt1.52□□□□□ -2.17
LSM1P47017 YOL019W-AYOL019W-A 153 nt1.52□□□□□ -2.17
LSM1P47017 TAZ1YPR140W 1146 nt1.52□□□□□ -2.17
LSM1P47017 YBP1YBR216C 2025 nt1.51□□□□□ -2.17
LSM1P47017 YJL070CYJL070C 2667 nt1.51□□□□□ -2.17
LSM1P47017 LYS9YNR050C 1341 nt1.51□□□□□ -2.17
LSM1P47017 TDA10YGR205W 873 nt1.51□□□□□ -2.17
LSM1P47017 YLR053CYLR053C 327 nt1.51□□□□□ -2.17
LSM1P47017 YMR099CYMR099C 894 nt1.51□□□□□ -2.17
LSM1P47017 YBR013CYBR013C 390 nt1.51□□□□□ -2.17
Retrieved 100 of 7,029 protein–RNA pairs in 28.8 ms