Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 AGC1YPR021C 2709 nt1.71□□□□□ -2.14
CUP9P41817 YPR097WYPR097W 3222 nt1.71□□□□□ -2.14
CUP9P41817 PIB1YDR313C 861 nt1.71□□□□□ -2.14
CUP9P41817 TWF1YGR080W 999 nt1.71□□□□□ -2.14
CUP9P41817 PFS1YHR185C 714 nt1.71□□□□□ -2.14
CUP9P41817 UTP30YKR060W 825 nt1.71□□□□□ -2.14
CUP9P41817 RIF2YLR453C 1188 nt1.71□□□□□ -2.14
CUP9P41817 CRS5YOR031W 210 nt1.71□□□□□ -2.14
CUP9P41817 YOR392WYOR392W 444 nt1.71□□□□□ -2.14
CUP9P41817 SUT2YPR009W 807 nt1.71□□□□□ -2.14
CUP9P41817 ARP7YPR034W 1434 nt1.71□□□□□ -2.14
CUP9P41817 SET2YJL168C 2202 nt1.71□□□□□ -2.14
CUP9P41817 YCR013CYCR013C 648 nt1.7□□□□□ -2.14
CUP9P41817 YCR024C-BYCR024C-B 267 nt1.7□□□□□ -2.14
CUP9P41817 AIM6YDL237W 1173 nt1.7□□□□□ -2.14
CUP9P41817 YMR31YFR049W 372 nt1.7□□□□□ -2.14
CUP9P41817 ANS1YHR126C 480 nt1.7□□□□□ -2.14
CUP9P41817 DLT1YMR126C 1029 nt1.7□□□□□ -2.14
CUP9P41817 YMR272W-BYMR272W-B 108 nt1.7□□□□□ -2.14
CUP9P41817 UBR1YGR184C 5853 nt1.7□□□□□ -2.14
CUP9P41817 GCD2YGR083C 1956 nt1.7□□□□□ -2.14
CUP9P41817 PUF4YGL014W 2667 nt1.7□□□□□ -2.14
CUP9P41817 DNF3YMR162C 4971 nt1.7□□□□□ -2.14
CUP9P41817 JJJ2YJL162C 1752 nt1.7□□□□□ -2.14
CUP9P41817 STD1YOR047C 1335 nt1.69□□□□□ -2.14
CUP9P41817 MPH1YIR002C 2982 nt1.69□□□□□ -2.14
CUP9P41817 snR76snR76 109 nt1.69□□□□□ -2.14
CUP9P41817 NRG1YDR043C 696 nt1.69□□□□□ -2.14
CUP9P41817 YFL015CYFL015C 495 nt1.69□□□□□ -2.14
CUP9P41817 YIL141WYIL141W 390 nt1.69□□□□□ -2.14
CUP9P41817 HOT13YKL084W 351 nt1.69□□□□□ -2.14
CUP9P41817 RGM1YMR182C 636 nt1.69□□□□□ -2.14
CUP9P41817 CCL1YPR025C 1182 nt1.69□□□□□ -2.14
CUP9P41817 ALY1YKR021W 2748 nt1.69□□□□□ -2.14
CUP9P41817 PCK1YKR097W 1650 nt1.68□□□□□ -2.14
CUP9P41817 YER119C-AYER119C-A 372 nt1.68□□□□□ -2.14
CUP9P41817 YGL117WYGL117W 798 nt1.68□□□□□ -2.14
CUP9P41817 NYV1YLR093C 762 nt1.68□□□□□ -2.14
CUP9P41817 RPS17AYML024W 411 nt1.68□□□□□ -2.14
CUP9P41817 CTL1YMR180C 963 nt1.68□□□□□ -2.14
CUP9P41817 DYN3YMR299C 939 nt1.68□□□□□ -2.14
CUP9P41817 SLM4YBR077C 489 nt1.68□□□□□ -2.14
CUP9P41817 MYO2YOR326W 4725 nt1.68□□□□□ -2.14
CUP9P41817 DIS3YOL021C 3006 nt1.68□□□□□ -2.14
CUP9P41817 CBF2YGR140W 2871 nt1.68□□□□□ -2.14
CUP9P41817 NUP100YKL068W 2880 nt1.68□□□□□ -2.14
CUP9P41817 YJR098CYJR098C 1971 nt1.67□□□□□ -2.14
CUP9P41817 YPD1YDL235C 504 nt1.67□□□□□ -2.14
CUP9P41817 GPI19YDR437W 423 nt1.67□□□□□ -2.14
CUP9P41817 YER068C-AYER068C-A 432 nt1.67□□□□□ -2.14
CUP9P41817 IMP3YHR148W 552 nt1.67□□□□□ -2.14
CUP9P41817 YLL047WYLL047W 384 nt1.67□□□□□ -2.14
CUP9P41817 IZH4YOL101C 939 nt1.67□□□□□ -2.14
CUP9P41817 HUA2YOR284W 732 nt1.67□□□□□ -2.14
CUP9P41817 YPL039WYPL039W 951 nt1.67□□□□□ -2.14
CUP9P41817 GIP3YPL137C 3831 nt1.67□□□□□ -2.14
CUP9P41817 YDL118WYDL118W 381 nt1.66□□□□□ -2.14
CUP9P41817 SEC4YFL005W 648 nt1.66□□□□□ -2.14
CUP9P41817 YKL065W-AYKL065W-A 222 nt1.66□□□□□ -2.14
CUP9P41817 RNP1YLL046C 750 nt1.66□□□□□ -2.14
CUP9P41817 YLR154W-AYLR154W-A 186 nt1.66□□□□□ -2.14
CUP9P41817 ESF2YNR054C 951 nt1.66□□□□□ -2.14
CUP9P41817 MRPL40YPL173W 894 nt1.66□□□□□ -2.14
CUP9P41817 FUS1YCL027W 1539 nt1.66□□□□□ -2.14
CUP9P41817 RGI1YER067W 486 nt1.65□□□□□ -2.15
CUP9P41817 IGO1YNL157W 507 nt1.65□□□□□ -2.15
CUP9P41817 MER1YNL210W 813 nt1.65□□□□□ -2.15
CUP9P41817 YAP7YOL028C 738 nt1.65□□□□□ -2.15
CUP9P41817 FYV12YOR183W 390 nt1.65□□□□□ -2.15
CUP9P41817 MUD1YBR119W 897 nt1.65□□□□□ -2.15
CUP9P41817 RIT1YMR283C 1542 nt1.65□□□□□ -2.15
CUP9P41817 YEL1YBL060W 2064 nt1.65□□□□□ -2.15
CUP9P41817 MAL33YBR297W 1407 nt1.65□□□□□ -2.15
CUP9P41817 PSK2YOL045W 3306 nt1.65□□□□□ -2.15
CUP9P41817 YDR203WYDR203W 318 nt1.64□□□□□ -2.15
CUP9P41817 YER107W-AYER107W-A 321 nt1.64□□□□□ -2.15
CUP9P41817 YLR050CYLR050C 486 nt1.64□□□□□ -2.15
CUP9P41817 IRC21YMR073C 606 nt1.64□□□□□ -2.15
CUP9P41817 MRPL17YNL252C 846 nt1.64□□□□□ -2.15
CUP9P41817 YPL135C-AYPL135C-A 174 nt1.64□□□□□ -2.15
CUP9P41817 RPC40YPR110C 1008 nt1.64□□□□□ -2.15
CUP9P41817 ICS2YBR157C 768 nt1.64□□□□□ -2.15
CUP9P41817 NTC20YBR188C 423 nt1.64□□□□□ -2.15
CUP9P41817 KAR5YMR065W 1515 nt1.64□□□□□ -2.15
CUP9P41817 PEP1YBL017C 4740 nt1.64□□□□□ -2.15
CUP9P41817 ART10YLR392C 1557 nt1.64□□□□□ -2.15
CUP9P41817 AEP1YMR064W 1557 nt1.64□□□□□ -2.15
CUP9P41817 RLF2YPR018W 1821 nt1.63□□□□□ -2.15
CUP9P41817 ADK1YDR226W 669 nt1.63□□□□□ -2.15
CUP9P41817 ACB1YGR037C 264 nt1.63□□□□□ -2.15
CUP9P41817 MVB12YGR206W 306 nt1.63□□□□□ -2.15
CUP9P41817 YJL114WYJL114W 681 nt1.63□□□□□ -2.15
CUP9P41817 RTT107YHR154W 3213 nt1.63□□□□□ -2.15
CUP9P41817 VPS34YLR240W 2628 nt1.62□□□□□ -2.15
CUP9P41817 CCE1YKL011C 1062 nt1.62□□□□□ -2.15
CUP9P41817 YKL069WYKL069W 543 nt1.62□□□□□ -2.15
CUP9P41817 MRP49YKL167C 414 nt1.62□□□□□ -2.15
CUP9P41817 YNL089CYNL089C 477 nt1.62□□□□□ -2.15
CUP9P41817 HEM4YOR278W 828 nt1.62□□□□□ -2.15
CUP9P41817 YBR197CYBR197C 654 nt1.62□□□□□ -2.15
Retrieved 100 of 7,029 protein–RNA pairs in 25.9 ms