Protein–RNA interactions for Protein: P38848

PEX28, Peroxisomal membrane protein PEX28, yeastyeast

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PEX28P38848 FRE8YLR047C 2061 nt4.04□□□□□ -1.76
PEX28P38848 HHT2YNL031C 411 nt4.04□□□□□ -1.76
PEX28P38848 YOR146WYOR146W 306 nt4.04□□□□□ -1.76
PEX28P38848 YPL080CYPL080C 327 nt4.04□□□□□ -1.76
PEX28P38848 VAC7YNL054W 3498 nt4.04□□□□□ -1.76
PEX28P38848 CWH41YGL027C 2502 nt4.03□□□□□ -1.76
PEX28P38848 YDR089WYDR089W 2610 nt4.03□□□□□ -1.76
PEX28P38848 AAD3YCR107W 1092 nt4.03□□□□□ -1.76
PEX28P38848 ATP5YDR298C 639 nt4.03□□□□□ -1.76
PEX28P38848 RNR4YGR180C 1038 nt4.03□□□□□ -1.76
PEX28P38848 JIP3YLR331C 378 nt4.03□□□□□ -1.76
PEX28P38848 AIM32YML050W 936 nt4.03□□□□□ -1.76
PEX28P38848 PFY1YOR122C 381 nt4.03□□□□□ -1.76
PEX28P38848 snR13snR13 124 nt4.03□□□□□ -1.76
PEX28P38848 YPL039WYPL039W 951 nt4.03□□□□□ -1.76
PEX28P38848 MED1YPR070W 1701 nt4.03□□□□□ -1.76
PEX28P38848 TCO89YPL180W 2400 nt4.03□□□□□ -1.76
PEX28P38848 DIP2YLR129W 2832 nt4.03□□□□□ -1.76
PEX28P38848 MAK5YBR142W 2322 nt4.03□□□□□ -1.77
PEX28P38848 HMG1YML075C 3165 nt4.02□□□□□ -1.77
PEX28P38848 NUP2YLR335W 2163 nt4.02□□□□□ -1.77
PEX28P38848 YKL050CYKL050C 2769 nt4.02□□□□□ -1.77
PEX28P38848 tC(GCA)BtC(GCA)B 72 nt4.02□□□□□ -1.77
PEX28P38848 tC(GCA)GtC(GCA)G 72 nt4.02□□□□□ -1.77
PEX28P38848 tC(GCA)P1tC(GCA)P1 72 nt4.02□□□□□ -1.77
PEX28P38848 tC(GCA)P2tC(GCA)P2 72 nt4.02□□□□□ -1.77
PEX28P38848 RTT105YER104W 627 nt4.02□□□□□ -1.77
PEX28P38848 YGR025WYGR025W 303 nt4.02□□□□□ -1.77
PEX28P38848 YKL156C-AYKL156C-A 117 nt4.02□□□□□ -1.77
PEX28P38848 MPS1YDL028C 2295 nt4.02□□□□□ -1.77
PEX28P38848 EMP70YLR083C 2004 nt4.02□□□□□ -1.77
PEX28P38848 YJR030CYJR030C 2238 nt4.01□□□□□ -1.77
PEX28P38848 SPC19YDR201W 498 nt4.01□□□□□ -1.77
PEX28P38848 RRT13YER066W 558 nt4.01□□□□□ -1.77
PEX28P38848 SUI1YNL244C 327 nt4.01□□□□□ -1.77
PEX28P38848 YBR225WYBR225W 2703 nt4.01□□□□□ -1.77
PEX28P38848 SMI1YGR229C 1518 nt4□□□□□ -1.77
PEX28P38848 YDR230WYDR230W 348 nt4□□□□□ -1.77
PEX28P38848 ATP17YDR377W 306 nt4□□□□□ -1.77
PEX28P38848 RPL22AYLR061W 366 nt4□□□□□ -1.77
PEX28P38848 URA10YMR271C 684 nt4□□□□□ -1.77
PEX28P38848 DGK1YOR311C 873 nt4□□□□□ -1.77
PEX28P38848 NUG1YER006W 1563 nt4□□□□□ -1.77
PEX28P38848 KIC1YHR102W 3243 nt4□□□□□ -1.77
PEX28P38848 YLR001CYLR001C 2589 nt4□□□□□ -1.77
PEX28P38848 RAD4YER162C 2265 nt3.99□□□□□ -1.77
PEX28P38848 AAD16YFL057C 459 nt3.99□□□□□ -1.77
PEX28P38848 HIS5YIL116W 1158 nt3.99□□□□□ -1.77
PEX28P38848 FUN12YAL035W 3009 nt3.99□□□□□ -1.77
PEX28P38848 CAF130YGR134W 3369 nt3.99□□□□□ -1.77
PEX28P38848 TRS85YDR108W 2097 nt3.98□□□□□ -1.77
PEX28P38848 YDR102CYDR102C 333 nt3.98□□□□□ -1.77
PEX28P38848 RPL29YFR032C-A 180 nt3.98□□□□□ -1.77
PEX28P38848 RPL15AYLR029C 615 nt3.98□□□□□ -1.77
PEX28P38848 BIL1YOR304C-A 231 nt3.98□□□□□ -1.77
PEX28P38848 SLM6YBR266C 453 nt3.98□□□□□ -1.77
PEX28P38848 RED1YLR263W 2484 nt3.98□□□□□ -1.77
PEX28P38848 SLM2YNL047C 1971 nt3.98□□□□□ -1.77
PEX28P38848 LOS1YKL205W 3303 nt3.98□□□□□ -1.77
PEX28P38848 MET4YNL103W 2019 nt3.97□□□□□ -1.77
PEX28P38848 OLE1YGL055W 1533 nt3.97□□□□□ -1.77
PEX28P38848 SMT3YDR510W 306 nt3.97□□□□□ -1.77
PEX28P38848 YEL057CYEL057C 702 nt3.97□□□□□ -1.77
PEX28P38848 ERG28YER044C 447 nt3.97□□□□□ -1.77
PEX28P38848 YFL032WYFL032W 321 nt3.97□□□□□ -1.77
PEX28P38848 YGR107WYGR107W 450 nt3.97□□□□□ -1.77
PEX28P38848 YHR063W-AYHR063W-A 336 nt3.97□□□□□ -1.77
PEX28P38848 YIL012WYIL012W 342 nt3.97□□□□□ -1.77
PEX28P38848 RPL39YJL189W 156 nt3.97□□□□□ -1.77
PEX28P38848 KIN82YCR091W 2163 nt3.97□□□□□ -1.77
PEX28P38848 EGT2YNL327W 3126 nt3.97□□□□□ -1.77
PEX28P38848 RAD1YPL022W 3303 nt3.96□□□□□ -1.77
PEX28P38848 SEN1YLR430W 6696 nt3.96□□□□□ -1.77
PEX28P38848 YDL094CYDL094C 510 nt3.96□□□□□ -1.78
PEX28P38848 SPG3YDR504C 384 nt3.96□□□□□ -1.78
PEX28P38848 GPP1YIL053W 753 nt3.96□□□□□ -1.78
PEX28P38848 POG1YIL122W 1056 nt3.96□□□□□ -1.78
PEX28P38848 LSM2YBL026W 288 nt3.96□□□□□ -1.78
PEX28P38848 TVP18YMR071C 504 nt3.96□□□□□ -1.78
PEX28P38848 YOR225WYOR225W 330 nt3.96□□□□□ -1.78
PEX28P38848 MNL1YHR204W 2391 nt3.96□□□□□ -1.78
PEX28P38848 MES1YGR264C 2256 nt3.95□□□□□ -1.78
PEX28P38848 YDR193WYDR193W 399 nt3.95□□□□□ -1.78
PEX28P38848 YER076W-AYER076W-A 348 nt3.95□□□□□ -1.78
PEX28P38848 YIR040CYIR040C 333 nt3.95□□□□□ -1.78
PEX28P38848 ISA1YLL027W 753 nt3.95□□□□□ -1.78
PEX28P38848 RPL19BYBL027W 570 nt3.95□□□□□ -1.78
PEX28P38848 YMR290W-AYMR290W-A 348 nt3.95□□□□□ -1.78
PEX28P38848 YMR320WYMR320W 306 nt3.95□□□□□ -1.78
PEX28P38848 RPS7BYNL096C 573 nt3.95□□□□□ -1.78
PEX28P38848 TIM18YOR297C 579 nt3.95□□□□□ -1.78
PEX28P38848 YPL276WYPL276W 438 nt3.95□□□□□ -1.78
PEX28P38848 ALY1YKR021W 2748 nt3.94□□□□□ -1.78
PEX28P38848 JJJ2YJL162C 1752 nt3.94□□□□□ -1.78
PEX28P38848 YKL100CYKL100C 1764 nt3.94□□□□□ -1.78
PEX28P38848 Q0032Q0032 291 nt3.94□□□□□ -1.78
PEX28P38848 PET191YJR034W 327 nt3.94□□□□□ -1.78
PEX28P38848 RPB11YOL005C 363 nt3.94□□□□□ -1.78
PEX28P38848 YBL108WYBL108W 306 nt3.94□□□□□ -1.78
PEX28P38848 TIR2YOR010C 756 nt3.94□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms