Protein–RNA interactions for Protein: P32561

RPD3, Histone deacetylase RPD3, yeastyeast

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPD3P32561 RPB2YOR151C 3675 nt3.57□□□□□ -1.84
RPD3P32561 JJJ2YJL162C 1752 nt3.56□□□□□ -1.84
RPD3P32561 NCR1YPL006W 3513 nt3.56□□□□□ -1.84
RPD3P32561 XRS2YDR369C 2565 nt3.56□□□□□ -1.84
RPD3P32561 RDN5-1RDN5-1 121 nt3.56□□□□□ -1.84
RPD3P32561 RDN5-6RDN5-6 121 nt3.56□□□□□ -1.84
RPD3P32561 NKP2YLR315W 462 nt3.56□□□□□ -1.84
RPD3P32561 YAF9YNL107W 681 nt3.56□□□□□ -1.84
RPD3P32561 CIN5YOR028C 888 nt3.56□□□□□ -1.84
RPD3P32561 PFY1YOR122C 381 nt3.56□□□□□ -1.84
RPD3P32561 MLH2YLR035C 2088 nt3.56□□□□□ -1.84
RPD3P32561 NIC96YFR002W 2520 nt3.55□□□□□ -1.84
RPD3P32561 RPL29YFR032C-A 180 nt3.55□□□□□ -1.84
RPD3P32561 JIP3YLR331C 378 nt3.55□□□□□ -1.84
RPD3P32561 VTI1YMR197C 654 nt3.55□□□□□ -1.84
RPD3P32561 HHT2YNL031C 411 nt3.55□□□□□ -1.84
RPD3P32561 YPL039WYPL039W 951 nt3.55□□□□□ -1.84
RPD3P32561 21S_rRNA21S_rRNA 3296 nt3.55□□□□□ -1.84
RPD3P32561 PMT6YGR199W 2280 nt3.54□□□□□ -1.84
RPD3P32561 YJR030CYJR030C 2238 nt3.54□□□□□ -1.84
RPD3P32561 KIN82YCR091W 2163 nt3.54□□□□□ -1.84
RPD3P32561 snR65snR65 100 nt3.54□□□□□ -1.84
RPD3P32561 YAR053WYAR053W 297 nt3.54□□□□□ -1.84
RPD3P32561 UBC7YMR022W 498 nt3.54□□□□□ -1.84
RPD3P32561 YNL043CYNL043C 321 nt3.54□□□□□ -1.84
RPD3P32561 snR13snR13 124 nt3.54□□□□□ -1.84
RPD3P32561 YOR282WYOR282W 321 nt3.54□□□□□ -1.84
RPD3P32561 YOR385WYOR385W 873 nt3.54□□□□□ -1.84
RPD3P32561 MTC4YBR255W 2085 nt3.54□□□□□ -1.84
RPD3P32561 UBP5YER144C 2418 nt3.54□□□□□ -1.84
RPD3P32561 DIE2YGR227W 1578 nt3.54□□□□□ -1.84
RPD3P32561 YJR003CYJR003C 1560 nt3.54□□□□□ -1.84
RPD3P32561 HFD1YMR110C 1599 nt3.54□□□□□ -1.84
RPD3P32561 MED1YPR070W 1701 nt3.53□□□□□ -1.84
RPD3P32561 SYT1YPR095C 3681 nt3.53□□□□□ -1.84
RPD3P32561 MRH1YDR033W 963 nt3.53□□□□□ -1.84
RPD3P32561 ATP17YDR377W 306 nt3.53□□□□□ -1.84
RPD3P32561 ERG28YER044C 447 nt3.53□□□□□ -1.84
RPD3P32561 AIM11YER093C-A 414 nt3.53□□□□□ -1.84
RPD3P32561 YJL169WYJL169W 369 nt3.53□□□□□ -1.84
RPD3P32561 YOR146WYOR146W 306 nt3.53□□□□□ -1.84
RPD3P32561 DGK1YOR311C 873 nt3.53□□□□□ -1.84
RPD3P32561 MCM7YBR202W 2538 nt3.53□□□□□ -1.84
RPD3P32561 HFM1YGL251C 3564 nt3.53□□□□□ -1.84
RPD3P32561 ALY1YKR021W 2748 nt3.52□□□□□ -1.85
RPD3P32561 URB2YJR041C 3525 nt3.52□□□□□ -1.85
RPD3P32561 ATP22YDR350C 2055 nt3.52□□□□□ -1.85
RPD3P32561 ACE2YLR131C 2313 nt3.52□□□□□ -1.85
RPD3P32561 FRQ1YDR373W 573 nt3.52□□□□□ -1.85
RPD3P32561 RRT13YER066W 558 nt3.52□□□□□ -1.85
RPD3P32561 TVP18YMR071C 504 nt3.52□□□□□ -1.85
RPD3P32561 SLM6YBR266C 453 nt3.52□□□□□ -1.85
RPD3P32561 SLP1YOR154W 1764 nt3.52□□□□□ -1.85
RPD3P32561 MKT1YNL085W 2493 nt3.52□□□□□ -1.85
RPD3P32561 KHA1YJL094C 2622 nt3.52□□□□□ -1.85
RPD3P32561 MUS81YDR386W 1899 nt3.52□□□□□ -1.85
RPD3P32561 ARG2YJL071W 1725 nt3.51□□□□□ -1.85
RPD3P32561 YDL176WYDL176W 2127 nt3.51□□□□□ -1.85
RPD3P32561 AHA1YDR214W 1053 nt3.51□□□□□ -1.85
RPD3P32561 YDR413CYDR413C 576 nt3.51□□□□□ -1.85
RPD3P32561 RPL1BYGL135W 654 nt3.51□□□□□ -1.85
RPD3P32561 YGR025WYGR025W 303 nt3.51□□□□□ -1.85
RPD3P32561 RNR4YGR180C 1038 nt3.51□□□□□ -1.85
RPD3P32561 RPL1AYPL220W 654 nt3.51□□□□□ -1.85
RPD3P32561 ATP25YMR098C 1839 nt3.51□□□□□ -1.85
RPD3P32561 YGR237CYGR237C 2358 nt3.51□□□□□ -1.85
RPD3P32561 DPH6YLR143W 2058 nt3.5□□□□□ -1.85
RPD3P32561 LCB5YLR260W 2064 nt3.5□□□□□ -1.85
RPD3P32561 HMRA2YCR096C 360 nt3.5□□□□□ -1.85
RPD3P32561 MCM22YJR135C 720 nt3.5□□□□□ -1.85
RPD3P32561 SRL3YKR091W 741 nt3.5□□□□□ -1.85
RPD3P32561 RPB11YOL005C 363 nt3.5□□□□□ -1.85
RPD3P32561 OST1YJL002C 1431 nt3.5□□□□□ -1.85
RPD3P32561 CPA2YJR109C 3357 nt3.49□□□□□ -1.85
RPD3P32561 RPO31YOR116C 4383 nt3.49□□□□□ -1.85
RPD3P32561 BAR1YIL015W 1764 nt3.49□□□□□ -1.85
RPD3P32561 NHP2YDL208W 471 nt3.49□□□□□ -1.85
RPD3P32561 YER097WYER097W 330 nt3.49□□□□□ -1.85
RPD3P32561 MRPL20YKR085C 588 nt3.49□□□□□ -1.85
RPD3P32561 RPL37AYLR185W 267 nt3.49□□□□□ -1.85
RPD3P32561 YOR192C-CYOR192C-C 237 nt3.49□□□□□ -1.85
RPD3P32561 ATP3YBR039W 936 nt3.49□□□□□ -1.85
RPD3P32561 YPR053CYPR053C 456 nt3.49□□□□□ -1.85
RPD3P32561 SWH1YAR042W 3567 nt3.49□□□□□ -1.85
RPD3P32561 SWT1YOR166C 1377 nt3.49□□□□□ -1.85
RPD3P32561 CHS3YBR023C 3498 nt3.49□□□□□ -1.85
RPD3P32561 YER076W-AYER076W-A 348 nt3.48□□□□□ -1.85
RPD3P32561 tL(UAG)JtL(UAG)J 82 nt3.48□□□□□ -1.85
RPD3P32561 tL(UAG)L1tL(UAG)L1 82 nt3.48□□□□□ -1.85
RPD3P32561 tL(UAG)L2tL(UAG)L2 82 nt3.48□□□□□ -1.85
RPD3P32561 YIL012WYIL012W 342 nt3.48□□□□□ -1.85
RPD3P32561 YIL054WYIL054W 318 nt3.48□□□□□ -1.85
RPD3P32561 LSM2YBL026W 288 nt3.48□□□□□ -1.85
RPD3P32561 NSL1YPL233W 651 nt3.48□□□□□ -1.85
RPD3P32561 SPT16YGL207W 3108 nt3.48□□□□□ -1.85
RPD3P32561 YSW1YBR148W 1830 nt3.47□□□□□ -1.85
RPD3P32561 YDR246W-AYDR246W-A 201 nt3.47□□□□□ -1.85
RPD3P32561 RAD6YGL058W 519 nt3.47□□□□□ -1.85
RPD3P32561 YIR040CYIR040C 333 nt3.47□□□□□ -1.85
RPD3P32561 URA10YMR271C 684 nt3.47□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 29.2 ms