Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 SSN8YNL025C 972 nt5.29□□□□□ -1.56
SPB4P25808 YPR077CYPR077C 372 nt5.29□□□□□ -1.56
SPB4P25808 PDR10YOR328W 4695 nt5.28□□□□□ -1.56
SPB4P25808 RPL34AYER056C-A 366 nt5.28□□□□□ -1.56
SPB4P25808 EFB1YAL003W 621 nt5.28□□□□□ -1.56
SPB4P25808 YBL006W-AYBL006W-A 150 nt5.28□□□□□ -1.56
SPB4P25808 YBL073WYBL073W 312 nt5.28□□□□□ -1.56
SPB4P25808 PGA1YNL158W 597 nt5.28□□□□□ -1.56
SPB4P25808 FAA1YOR317W 2103 nt5.28□□□□□ -1.56
SPB4P25808 DPB11YJL090C 2295 nt5.28□□□□□ -1.56
SPB4P25808 WIP1YDR374W-A 270 nt5.27□□□□□ -1.57
SPB4P25808 POG1YIL122W 1056 nt5.27□□□□□ -1.57
SPB4P25808 RPS21BYJL136C 264 nt5.27□□□□□ -1.57
SPB4P25808 RPL37AYLR185W 267 nt5.27□□□□□ -1.57
SPB4P25808 UPC2YDR213W 2742 nt5.27□□□□□ -1.57
SPB4P25808 SMI1YGR229C 1518 nt5.27□□□□□ -1.57
SPB4P25808 BAR1YIL015W 1764 nt5.27□□□□□ -1.57
SPB4P25808 HOT1YMR172W 2160 nt5.26□□□□□ -1.57
SPB4P25808 CWH41YGL027C 2502 nt5.26□□□□□ -1.57
SPB4P25808 YDR133CYDR133C 336 nt5.26□□□□□ -1.57
SPB4P25808 YER188C-AYER188C-A 300 nt5.26□□□□□ -1.57
SPB4P25808 YAL004WYAL004W 648 nt5.26□□□□□ -1.57
SPB4P25808 YKL156C-AYKL156C-A 117 nt5.26□□□□□ -1.57
SPB4P25808 SMA2YML066C 1110 nt5.26□□□□□ -1.57
SPB4P25808 snR51snR51 107 nt5.26□□□□□ -1.57
SPB4P25808 MES1YGR264C 2256 nt5.26□□□□□ -1.57
SPB4P25808 YMR196WYMR196W 3267 nt5.26□□□□□ -1.57
SPB4P25808 CTT1YGR088W 1689 nt5.25□□□□□ -1.57
SPB4P25808 HMF1YER057C 390 nt5.25□□□□□ -1.57
SPB4P25808 YGL188C-AYGL188C-A 141 nt5.25□□□□□ -1.57
SPB4P25808 YPL229WYPL229W 621 nt5.25□□□□□ -1.57
SPB4P25808 SSH4YKL124W 1740 nt5.24□□□□□ -1.57
SPB4P25808 IRC23YOR044W 474 nt5.24□□□□□ -1.57
SPB4P25808 MNL1YHR204W 2391 nt5.24□□□□□ -1.57
SPB4P25808 RTC1YOL138C 4026 nt5.24□□□□□ -1.57
SPB4P25808 YDR089WYDR089W 2610 nt5.24□□□□□ -1.57
SPB4P25808 VID27YNL212W 2349 nt5.23□□□□□ -1.57
SPB4P25808 RAD6YGL058W 519 nt5.23□□□□□ -1.57
SPB4P25808 RPC10YHR143W-A 213 nt5.23□□□□□ -1.57
SPB4P25808 YJR023CYJR023C 402 nt5.23□□□□□ -1.57
SPB4P25808 YKL050CYKL050C 2769 nt5.23□□□□□ -1.57
SPB4P25808 IRC10YOL015W 1761 nt5.22□□□□□ -1.57
SPB4P25808 URM1YIL008W 300 nt5.22□□□□□ -1.57
SPB4P25808 YJR140W-AYJR140W-A 150 nt5.22□□□□□ -1.57
SPB4P25808 SUI1YNL244C 327 nt5.22□□□□□ -1.57
SPB4P25808 YPL278CYPL278C 303 nt5.22□□□□□ -1.57
SPB4P25808 ELM1YKL048C 1923 nt5.22□□□□□ -1.57
SPB4P25808 NRP1YDL167C 2160 nt5.22□□□□□ -1.57
SPB4P25808 DPH6YLR143W 2058 nt5.22□□□□□ -1.57
SPB4P25808 YKL111CYKL111C 336 nt5.21□□□□□ -1.58
SPB4P25808 FSH3YOR280C 801 nt5.21□□□□□ -1.58
SPB4P25808 MPS1YDL028C 2295 nt5.21□□□□□ -1.58
SPB4P25808 FUN12YAL035W 3009 nt5.21□□□□□ -1.58
SPB4P25808 ALY1YKR021W 2748 nt5.2□□□□□ -1.58
SPB4P25808 URB2YJR041C 3525 nt5.2□□□□□ -1.58
SPB4P25808 LYS2YBR115C 4179 nt5.19□□□□□ -1.58
SPB4P25808 JJJ2YJL162C 1752 nt5.19□□□□□ -1.58
SPB4P25808 snR80snR80 171 nt5.19□□□□□ -1.58
SPB4P25808 PAU14YIL176C 363 nt5.19□□□□□ -1.58
SPB4P25808 PAU1YJL223C 363 nt5.19□□□□□ -1.58
SPB4P25808 SRL3YKR091W 741 nt5.19□□□□□ -1.58
SPB4P25808 SEC6YIL068C 2418 nt5.19□□□□□ -1.58
SPB4P25808 FOX2YKR009C 2703 nt5.19□□□□□ -1.58
SPB4P25808 GDE1YPL110C 3672 nt5.19□□□□□ -1.58
SPB4P25808 SLP1YOR154W 1764 nt5.19□□□□□ -1.58
SPB4P25808 VAC7YNL054W 3498 nt5.18□□□□□ -1.58
SPB4P25808 FRT2YAL028W 1587 nt5.18□□□□□ -1.58
SPB4P25808 RPL23AYBL087C 414 nt5.18□□□□□ -1.58
SPB4P25808 ISU1YPL135W 498 nt5.18□□□□□ -1.58
SPB4P25808 CHS3YBR023C 3498 nt5.17□□□□□ -1.58
SPB4P25808 CDC36YDL165W 576 nt5.17□□□□□ -1.58
SPB4P25808 TIF35YDR429C 825 nt5.17□□□□□ -1.58
SPB4P25808 IRC4YDR540C 540 nt5.17□□□□□ -1.58
SPB4P25808 YER023C-AYER023C-A 213 nt5.17□□□□□ -1.58
SPB4P25808 RPL30YGL030W 318 nt5.17□□□□□ -1.58
SPB4P25808 PAU23YLR037C 375 nt5.17□□□□□ -1.58
SPB4P25808 YNL198CYNL198C 303 nt5.17□□□□□ -1.58
SPB4P25808 AIP1YMR092C 1848 nt5.17□□□□□ -1.58
SPB4P25808 SSB2YNL209W 1842 nt5.17□□□□□ -1.58
SPB4P25808 SNX41YDR425W 1878 nt5.17□□□□□ -1.58
SPB4P25808 DNM1YLL001W 2274 nt5.17□□□□□ -1.58
SPB4P25808 NUP60YAR002W 1620 nt5.16□□□□□ -1.58
SPB4P25808 SMT3YDR510W 306 nt5.16□□□□□ -1.58
SPB4P25808 AST2YER101C 1293 nt5.16□□□□□ -1.58
SPB4P25808 YGL088WYGL088W 366 nt5.16□□□□□ -1.58
SPB4P25808 YBR085C-AYBR085C-A 258 nt5.16□□□□□ -1.58
SPB4P25808 TRM44YPL030W 1704 nt5.16□□□□□ -1.58
SPB4P25808 21S_rRNA21S_rRNA 3296 nt5.15□□□□□ -1.58
SPB4P25808 RKM1YPL208W 1752 nt5.15□□□□□ -1.58
SPB4P25808 tL(UAG)JtL(UAG)J 82 nt5.15□□□□□ -1.59
SPB4P25808 tL(UAG)L1tL(UAG)L1 82 nt5.15□□□□□ -1.59
SPB4P25808 tL(UAG)L2tL(UAG)L2 82 nt5.15□□□□□ -1.59
SPB4P25808 SEG2YKL105C 3399 nt5.15□□□□□ -1.59
SPB4P25808 KGD1YIL125W 3045 nt5.15□□□□□ -1.59
SPB4P25808 BYE1YKL005C 1785 nt5.14□□□□□ -1.59
SPB4P25808 RED1YLR263W 2484 nt5.14□□□□□ -1.59
SPB4P25808 PHO81YGR233C 3537 nt5.13□□□□□ -1.59
SPB4P25808 YCK3YER123W 1575 nt5.13□□□□□ -1.59
SPB4P25808 MRP8YKL142W 660 nt5.13□□□□□ -1.59
SPB4P25808 TAR1YLR154W-C 375 nt5.13□□□□□ -1.59
Retrieved 100 of 7,029 protein–RNA pairs in 38.5 ms