Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1DP16402 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1DP16402 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1DP16402 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HIST1H1DP16402 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1DP16402 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST1H1DP16402 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST1H1DP16402 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.53■□□□□ 0.4
HIST1H1DP16402 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1DP16402 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.53■□□□□ 0.4
HIST1H1DP16402 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1DP16402 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1DP16402 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST1H1DP16402 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
HIST1H1DP16402 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.53■□□□□ 0.4
HIST1H1DP16402 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HIST1H1DP16402 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HIST1H1DP16402 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.53■□□□□ 0.4
HIST1H1DP16402 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1DP16402 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
HIST1H1DP16402 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1DP16402 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HIST1H1DP16402 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HIST1H1DP16402 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H1DP16402 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H1DP16402 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
HIST1H1DP16402 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.52■□□□□ 0.4
HIST1H1DP16402 AC011484.1-201ENST00000377652 1995 ntBASIC17.52■□□□□ 0.4
HIST1H1DP16402 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.52■□□□□ 0.4
HIST1H1DP16402 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H1DP16402 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.52■□□□□ 0.4
HIST1H1DP16402 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H1DP16402 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.52■□□□□ 0.4
HIST1H1DP16402 IGHV3-19-201ENST00000521488 291 ntBASIC17.52■□□□□ 0.4
HIST1H1DP16402 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
HIST1H1DP16402 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HIST1H1DP16402 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
HIST1H1DP16402 AC112907.3-201ENST00000577781 2400 ntBASIC17.52■□□□□ 0.4
HIST1H1DP16402 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.52■□□□□ 0.4
HIST1H1DP16402 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.52■□□□□ 0.39
HIST1H1DP16402 AC005224.4-201ENST00000583262 1652 ntBASIC17.52■□□□□ 0.39
HIST1H1DP16402 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.52■□□□□ 0.39
HIST1H1DP16402 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1DP16402 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HIST1H1DP16402 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1DP16402 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1DP16402 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1DP16402 AC131281.2-201ENST00000520478 145 ntBASIC17.51■□□□□ 0.39
HIST1H1DP16402 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1DP16402 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.51■□□□□ 0.39
HIST1H1DP16402 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1DP16402 AC233992.3-201ENST00000607491 485 ntBASIC17.51■□□□□ 0.39
HIST1H1DP16402 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
HIST1H1DP16402 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.51■□□□□ 0.39
HIST1H1DP16402 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1DP16402 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HIST1H1DP16402 AC099778.1-201ENST00000568593 1911 ntBASIC17.51■□□□□ 0.39
HIST1H1DP16402 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H1DP16402 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST1H1DP16402 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H1DP16402 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
HIST1H1DP16402 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.5■□□□□ 0.39
HIST1H1DP16402 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.5■□□□□ 0.39
HIST1H1DP16402 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H1DP16402 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H1DP16402 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.5■□□□□ 0.39
HIST1H1DP16402 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H1DP16402 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H1DP16402 AC126544.1-201ENST00000580842 1059 ntBASIC17.5■□□□□ 0.39
HIST1H1DP16402 MIR4767-201ENST00000582827 78 ntBASIC17.5■□□□□ 0.39
HIST1H1DP16402 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
HIST1H1DP16402 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
HIST1H1DP16402 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H1DP16402 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H1DP16402 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HIST1H1DP16402 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HIST1H1DP16402 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
HIST1H1DP16402 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.49■□□□□ 0.39
HIST1H1DP16402 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST1H1DP16402 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
HIST1H1DP16402 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
HIST1H1DP16402 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.49■□□□□ 0.39
HIST1H1DP16402 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
HIST1H1DP16402 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.49■□□□□ 0.39
HIST1H1DP16402 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.49■□□□□ 0.39
HIST1H1DP16402 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
HIST1H1DP16402 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms