Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.69■■□□□ 1.06
RARAP10276 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
RARAP10276 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RARAP10276 AC010141.2-201ENST00000452426 721 ntBASIC21.69■■□□□ 1.06
RARAP10276 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.69■■□□□ 1.06
RARAP10276 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RARAP10276 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
RARAP10276 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.69■■□□□ 1.06
RARAP10276 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.69■■□□□ 1.06
RARAP10276 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
RARAP10276 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RARAP10276 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
RARAP10276 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RARAP10276 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
RARAP10276 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RARAP10276 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RARAP10276 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.68■■□□□ 1.06
RARAP10276 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.68■■□□□ 1.06
RARAP10276 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RARAP10276 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.68■■□□□ 1.06
RARAP10276 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.68■■□□□ 1.06
RARAP10276 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.68■■□□□ 1.06
RARAP10276 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.68■■□□□ 1.06
RARAP10276 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RARAP10276 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RARAP10276 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RARAP10276 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RARAP10276 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.68■■□□□ 1.06
RARAP10276 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.68■■□□□ 1.06
RARAP10276 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.68■■□□□ 1.06
RARAP10276 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.68■■□□□ 1.06
RARAP10276 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RARAP10276 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
RARAP10276 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
RARAP10276 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
RARAP10276 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RARAP10276 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RARAP10276 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
RARAP10276 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RARAP10276 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
RARAP10276 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RARAP10276 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RARAP10276 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RARAP10276 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.67■■□□□ 1.06
RARAP10276 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
RARAP10276 AC004854.2-201ENST00000608450 1441 ntBASIC21.67■■□□□ 1.06
RARAP10276 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.67■■□□□ 1.06
RARAP10276 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.67■■□□□ 1.06
RARAP10276 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.67■■□□□ 1.06
RARAP10276 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.67■■□□□ 1.06
RARAP10276 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.67■■□□□ 1.06
RARAP10276 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RARAP10276 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RARAP10276 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.66■■□□□ 1.06
RARAP10276 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.66■■□□□ 1.06
RARAP10276 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.66■■□□□ 1.06
RARAP10276 DUX4L2-201ENST00000561772 1275 ntBASIC21.66■■□□□ 1.06
RARAP10276 AP001160.3-201ENST00000601484 763 ntBASIC21.66■■□□□ 1.06
RARAP10276 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.66■■□□□ 1.06
RARAP10276 DUX4L6-201ENST00000626483 1275 ntBASIC21.66■■□□□ 1.06
RARAP10276 DUX4L1-201ENST00000627662 1275 ntBASIC21.66■■□□□ 1.06
RARAP10276 DUX4L8-201ENST00000629013 1275 ntBASIC21.66■■□□□ 1.06
RARAP10276 DUX4L3-201ENST00000630187 1275 ntBASIC21.66■■□□□ 1.06
RARAP10276 DUX4L7-201ENST00000630678 1275 ntBASIC21.66■■□□□ 1.06
RARAP10276 DUX4L5-201ENST00000630834 1275 ntBASIC21.66■■□□□ 1.06
RARAP10276 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.66■■□□□ 1.06
RARAP10276 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RARAP10276 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RARAP10276 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.66■■□□□ 1.06
RARAP10276 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RARAP10276 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
RARAP10276 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
RARAP10276 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
RARAP10276 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
RARAP10276 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RARAP10276 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RARAP10276 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.65■■□□□ 1.06
RARAP10276 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARAP10276 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARAP10276 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARAP10276 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RARAP10276 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RARAP10276 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARAP10276 KRT18P61-201ENST00000585825 1298 ntBASIC21.65■■□□□ 1.06
RARAP10276 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.65■■□□□ 1.06
RARAP10276 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.65■■□□□ 1.06
RARAP10276 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARAP10276 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
RARAP10276 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
RARAP10276 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RARAP10276 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARAP10276 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RARAP10276 AC027702.1-201ENST00000563810 1770 ntBASIC21.64■■□□□ 1.06
RARAP10276 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RARAP10276 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RARAP10276 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RARAP10276 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RARAP10276 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
RARAP10276 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RARAP10276 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms