Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 IRC21YMR073C 606 nt1.56□□□□□ -2.16
RPL40BP0CH09 SLM4YBR077C 489 nt1.56□□□□□ -2.16
RPL40BP0CH09 YPR177CYPR177C 372 nt1.56□□□□□ -2.16
RPL40BP0CH09 YIL080WYIL080W 4722 nt1.56□□□□□ -2.16
RPL40BP0CH09 OST1YJL002C 1431 nt1.56□□□□□ -2.16
RPL40BP0CH09 MYO2YOR326W 4725 nt1.55□□□□□ -2.16
RPL40BP0CH09 EAF1YDR359C 2949 nt1.55□□□□□ -2.16
RPL40BP0CH09 RAV2YDR202C 1056 nt1.55□□□□□ -2.16
RPL40BP0CH09 TAN1YGL232W 870 nt1.55□□□□□ -2.16
RPL40BP0CH09 SFT1YKL006C-A 294 nt1.55□□□□□ -2.16
RPL40BP0CH09 YOL114CYOL114C 609 nt1.55□□□□□ -2.16
RPL40BP0CH09 CRS5YOR031W 210 nt1.55□□□□□ -2.16
RPL40BP0CH09 YOR072W-AYOR072W-A 249 nt1.55□□□□□ -2.16
RPL40BP0CH09 TRM2YKR056W 1920 nt1.55□□□□□ -2.16
RPL40BP0CH09 SSF1YHR066W 1362 nt1.55□□□□□ -2.16
RPL40BP0CH09 VPS9YML097C 1356 nt1.55□□□□□ -2.16
RPL40BP0CH09 AVT5YBL089W 1380 nt1.55□□□□□ -2.16
RPL40BP0CH09 RGL1YPL066W 1440 nt1.55□□□□□ -2.16
RPL40BP0CH09 REV1YOR346W 2958 nt1.55□□□□□ -2.16
RPL40BP0CH09 CDC27YBL084C 2277 nt1.54□□□□□ -2.16
RPL40BP0CH09 PCL2YDL127W 927 nt1.54□□□□□ -2.16
RPL40BP0CH09 NRG1YDR043C 696 nt1.54□□□□□ -2.16
RPL40BP0CH09 RNR4YGR180C 1038 nt1.54□□□□□ -2.16
RPL40BP0CH09 YGR219WYGR219W 342 nt1.54□□□□□ -2.16
RPL40BP0CH09 NOP19YGR251W 591 nt1.54□□□□□ -2.16
RPL40BP0CH09 YJR061WYJR061W 2808 nt1.53□□□□□ -2.16
RPL40BP0CH09 UBR2YLR024C 5619 nt1.53□□□□□ -2.16
RPL40BP0CH09 YDR203WYDR203W 318 nt1.53□□□□□ -2.16
RPL40BP0CH09 RNH202YDR279W 1053 nt1.53□□□□□ -2.16
RPL40BP0CH09 YGL138CYGL138C 1038 nt1.53□□□□□ -2.16
RPL40BP0CH09 YAL042C-AYAL042C-A 378 nt1.53□□□□□ -2.16
RPL40BP0CH09 OMA1YKR087C 1038 nt1.53□□□□□ -2.16
RPL40BP0CH09 APM3YBR288C 1452 nt1.53□□□□□ -2.16
RPL40BP0CH09 DBF20YPR111W 1695 nt1.52□□□□□ -2.17
RPL40BP0CH09 UTP6YDR449C 1323 nt1.52□□□□□ -2.17
RPL40BP0CH09 YKL162CYKL162C 1209 nt1.52□□□□□ -2.17
RPL40BP0CH09 UTP30YKR060W 825 nt1.52□□□□□ -2.17
RPL40BP0CH09 YAL069WYAL069W 315 nt1.52□□□□□ -2.17
RPL40BP0CH09 MRPS17YMR188C 714 nt1.52□□□□□ -2.17
RPL40BP0CH09 AIM4YBR194W 372 nt1.52□□□□□ -2.17
RPL40BP0CH09 IML1YJR138W 4755 nt1.52□□□□□ -2.17
RPL40BP0CH09 PLM2YDR501W 1566 nt1.51□□□□□ -2.17
RPL40BP0CH09 YPR097WYPR097W 3222 nt1.51□□□□□ -2.17
RPL40BP0CH09 CPR5YDR304C 678 nt1.51□□□□□ -2.17
RPL40BP0CH09 MIG2YGL209W 1149 nt1.51□□□□□ -2.17
RPL40BP0CH09 YJL169WYJL169W 369 nt1.51□□□□□ -2.17
RPL40BP0CH09 AIM36YMR157C 768 nt1.51□□□□□ -2.17
RPL40BP0CH09 IGO1YNL157W 507 nt1.51□□□□□ -2.17
RPL40BP0CH09 YNL276CYNL276C 396 nt1.51□□□□□ -2.17
RPL40BP0CH09 PIN3YPR154W 648 nt1.51□□□□□ -2.17
RPL40BP0CH09 MDM32YOR147W 1869 nt1.51□□□□□ -2.17
RPL40BP0CH09 MON2YNL297C 4911 nt1.5□□□□□ -2.17
RPL40BP0CH09 YPR089WYPR089W 2667 nt1.5□□□□□ -2.17
RPL40BP0CH09 RRG1YDR065W 1098 nt1.5□□□□□ -2.17
RPL40BP0CH09 YDR461C-AYDR461C-A 243 nt1.5□□□□□ -2.17
RPL40BP0CH09 YGR190CYGR190C 366 nt1.5□□□□□ -2.17
RPL40BP0CH09 VMA10YHR039C-A 345 nt1.5□□□□□ -2.17
RPL40BP0CH09 tT(UGU)HtT(UGU)H 72 nt1.5□□□□□ -2.17
RPL40BP0CH09 YKR075CYKR075C 924 nt1.5□□□□□ -2.17
RPL40BP0CH09 LIP2YLR239C 987 nt1.5□□□□□ -2.17
RPL40BP0CH09 YML090WYML090W 387 nt1.5□□□□□ -2.17
RPL40BP0CH09 BIT61YJL058C 1632 nt1.5□□□□□ -2.17
RPL40BP0CH09 APC5YOR249C 2058 nt1.49□□□□□ -2.17
RPL40BP0CH09 SHE9YDR393W 1371 nt1.49□□□□□ -2.17
RPL40BP0CH09 WHI3YNL197C 1986 nt1.49□□□□□ -2.17
RPL40BP0CH09 URB2YJR041C 3525 nt1.49□□□□□ -2.17
RPL40BP0CH09 FMN1YDR236C 657 nt1.49□□□□□ -2.17
RPL40BP0CH09 HTD2YHR067W 843 nt1.49□□□□□ -2.17
RPL40BP0CH09 MMF1YIL051C 438 nt1.49□□□□□ -2.17
RPL40BP0CH09 PAU8YAL068C 363 nt1.49□□□□□ -2.17
RPL40BP0CH09 YBL073WYBL073W 312 nt1.49□□□□□ -2.17
RPL40BP0CH09 PAU20YOL161C 363 nt1.49□□□□□ -2.17
RPL40BP0CH09 DOP1YDR141C 5097 nt1.48□□□□□ -2.17
RPL40BP0CH09 TTI1YKL033W 3117 nt1.48□□□□□ -2.17
RPL40BP0CH09 YDR320W-BYDR320W-B 138 nt1.48□□□□□ -2.17
RPL40BP0CH09 YNL235CYNL235C 432 nt1.48□□□□□ -2.17
RPL40BP0CH09 RPS10AYOR293W 318 nt1.48□□□□□ -2.17
RPL40BP0CH09 LTP1YPR073C 486 nt1.48□□□□□ -2.17
RPL40BP0CH09 CSH1YBR161W 1131 nt1.48□□□□□ -2.17
RPL40BP0CH09 RRP7YCL031C 894 nt1.48□□□□□ -2.17
RPL40BP0CH09 RIT1YMR283C 1542 nt1.48□□□□□ -2.17
RPL40BP0CH09 YLR035C-AYLR035C-A 3468 nt1.48□□□□□ -2.17
RPL40BP0CH09 TFB1YDR311W 1929 nt1.48□□□□□ -2.17
RPL40BP0CH09 YEL1YBL060W 2064 nt1.47□□□□□ -2.17
RPL40BP0CH09 ARI1YGL157W 1044 nt1.47□□□□□ -2.17
RPL40BP0CH09 PRP38YGR075C 729 nt1.47□□□□□ -2.17
RPL40BP0CH09 YIL156W-AYIL156W-A 402 nt1.47□□□□□ -2.17
RPL40BP0CH09 RPS17AYML024W 411 nt1.47□□□□□ -2.17
RPL40BP0CH09 MRPL27YBR282W 441 nt1.47□□□□□ -2.17
RPL40BP0CH09 MSL5YLR116W 1431 nt1.47□□□□□ -2.17
RPL40BP0CH09 ECM11YDR446W 909 nt1.46□□□□□ -2.18
RPL40BP0CH09 MPO1YGL010W 525 nt1.46□□□□□ -2.18
RPL40BP0CH09 RGI2YIL057C 495 nt1.46□□□□□ -2.18
RPL40BP0CH09 YJL202CYJL202C 348 nt1.46□□□□□ -2.18
RPL40BP0CH09 MCM22YJR135C 720 nt1.46□□□□□ -2.18
RPL40BP0CH09 TRX1YLR043C 312 nt1.46□□□□□ -2.18
RPL40BP0CH09 YLR154W-AYLR154W-A 186 nt1.46□□□□□ -2.18
RPL40BP0CH09 YLR225CYLR225C 1224 nt1.46□□□□□ -2.18
RPL40BP0CH09 PKR1YMR123W 369 nt1.46□□□□□ -2.18
RPL40BP0CH09 YBL094CYBL094C 333 nt1.46□□□□□ -2.18
Retrieved 100 of 7,029 protein–RNA pairs in 20.7 ms