Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.52■□□□□ 0.71
RAB40ALP0C0E4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RAB40ALP0C0E4 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 MCRIP2P1-201ENST00000394346 511 ntBASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 OR2A1-AS1-201ENST00000462305 773 ntBASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 AC007375.3-201ENST00000600936 2314 ntBASIC19.5■□□□□ 0.71
RAB40ALP0C0E4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40ALP0C0E4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40ALP0C0E4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40ALP0C0E4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40ALP0C0E4 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB40ALP0C0E4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40ALP0C0E4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40ALP0C0E4 AC007322.3-201ENST00000426526 701 ntBASIC19.49■□□□□ 0.71
RAB40ALP0C0E4 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB40ALP0C0E4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.49■□□□□ 0.71
RAB40ALP0C0E4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.49■□□□□ 0.71
RAB40ALP0C0E4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40ALP0C0E4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RAB40ALP0C0E4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 AL355472.2-201ENST00000422958 438 ntBASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 AL589743.5-201ENST00000616611 1050 ntBASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.48■□□□□ 0.71
RAB40ALP0C0E4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 KRT17P1-201ENST00000399211 1546 ntBASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 ESRRAP1-201ENST00000400596 1257 ntBASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.47■□□□□ 0.71
RAB40ALP0C0E4 AC008687.6-201ENST00000596318 630 ntBASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms