Protein–RNA interactions for Protein: P09007

SRD1, Pre-rRNA-processing protein SRD1, yeastyeast

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SRD1P09007 ALY1YKR021W 2748 nt3.61□□□□□ -1.83
SRD1P09007 YHL009W-AYHL009W-A 1242 nt3.61□□□□□ -1.83
SRD1P09007 YAL037WYAL037W 804 nt3.61□□□□□ -1.83
SRD1P09007 VPH2YKL119C 648 nt3.61□□□□□ -1.83
SRD1P09007 RPL23AYBL087C 414 nt3.61□□□□□ -1.83
SRD1P09007 MES1YGR264C 2256 nt3.61□□□□□ -1.83
SRD1P09007 FAS1YKL182W 6156 nt3.61□□□□□ -1.83
SRD1P09007 BYE1YKL005C 1785 nt3.61□□□□□ -1.83
SRD1P09007 GPI10YGL142C 1851 nt3.6□□□□□ -1.83
SRD1P09007 SPA2YLL021W 4401 nt3.6□□□□□ -1.83
SRD1P09007 LIF1YGL090W 1266 nt3.6□□□□□ -1.83
SRD1P09007 YHR125WYHR125W 306 nt3.6□□□□□ -1.83
SRD1P09007 tV(CAC)DtV(CAC)D 73 nt3.6□□□□□ -1.83
SRD1P09007 tV(CAC)HtV(CAC)H 73 nt3.6□□□□□ -1.83
SRD1P09007 YIL175WYIL175W 318 nt3.6□□□□□ -1.83
SRD1P09007 OST6YML019W 999 nt3.6□□□□□ -1.83
SRD1P09007 TIF11YMR260C 462 nt3.6□□□□□ -1.83
SRD1P09007 NGL1YOL042W 1092 nt3.6□□□□□ -1.83
SRD1P09007 YOR073W-AYOR073W-A 234 nt3.6□□□□□ -1.83
SRD1P09007 YOR248WYOR248W 303 nt3.6□□□□□ -1.83
SRD1P09007 XRN1YGL173C 4587 nt3.6□□□□□ -1.83
SRD1P09007 PWP2YCR057C 2772 nt3.6□□□□□ -1.83
SRD1P09007 ZDS2YML109W 2829 nt3.59□□□□□ -1.83
SRD1P09007 YDR269CYDR269C 324 nt3.59□□□□□ -1.83
SRD1P09007 YER079WYER079W 633 nt3.59□□□□□ -1.83
SRD1P09007 YGR017WYGR017W 894 nt3.59□□□□□ -1.83
SRD1P09007 LSM8YJR022W 330 nt3.59□□□□□ -1.83
SRD1P09007 MRP49YKL167C 414 nt3.59□□□□□ -1.83
SRD1P09007 SHH3YMR118C 591 nt3.59□□□□□ -1.83
SRD1P09007 GOT1YMR292W 417 nt3.59□□□□□ -1.83
SRD1P09007 YNL179CYNL179C 438 nt3.59□□□□□ -1.83
SRD1P09007 IRC16YPR038W 360 nt3.59□□□□□ -1.83
SRD1P09007 ARK1YNL020C 1917 nt3.59□□□□□ -1.83
SRD1P09007 BNI4YNL233W 2679 nt3.59□□□□□ -1.83
SRD1P09007 ATP22YDR350C 2055 nt3.59□□□□□ -1.83
SRD1P09007 FAA2YER015W 2235 nt3.59□□□□□ -1.84
SRD1P09007 ANB1YJR047C 474 nt3.58□□□□□ -1.84
SRD1P09007 TVP18YMR071C 504 nt3.58□□□□□ -1.84
SRD1P09007 PKR1YMR123W 369 nt3.58□□□□□ -1.84
SRD1P09007 YOL159CYOL159C 516 nt3.58□□□□□ -1.84
SRD1P09007 YOR029WYOR029W 336 nt3.58□□□□□ -1.84
SRD1P09007 STN1YDR082W 1485 nt3.58□□□□□ -1.84
SRD1P09007 RUD3YOR216C 1455 nt3.58□□□□□ -1.84
SRD1P09007 YMR018WYMR018W 1545 nt3.58□□□□□ -1.84
SRD1P09007 ETP1YHL010C 1758 nt3.58□□□□□ -1.84
SRD1P09007 SRC1YML034W 2505 nt3.58□□□□□ -1.84
SRD1P09007 MYO5YMR109W 3660 nt3.57□□□□□ -1.84
SRD1P09007 ARO1YDR127W 4767 nt3.57□□□□□ -1.84
SRD1P09007 tC(GCA)BtC(GCA)B 72 nt3.57□□□□□ -1.84
SRD1P09007 tC(GCA)GtC(GCA)G 72 nt3.57□□□□□ -1.84
SRD1P09007 tC(GCA)P1tC(GCA)P1 72 nt3.57□□□□□ -1.84
SRD1P09007 tC(GCA)P2tC(GCA)P2 72 nt3.57□□□□□ -1.84
SRD1P09007 YER135CYER135C 393 nt3.57□□□□□ -1.84
SRD1P09007 RTR1YER139C 681 nt3.57□□□□□ -1.84
SRD1P09007 YTA7YGR270W 4140 nt3.57□□□□□ -1.84
SRD1P09007 RAD33YML011C 534 nt3.57□□□□□ -1.84
SRD1P09007 YOR293C-AYOR293C-A 150 nt3.57□□□□□ -1.84
SRD1P09007 REC8YPR007C 2043 nt3.57□□□□□ -1.84
SRD1P09007 MSS18YPR134W 807 nt3.57□□□□□ -1.84
SRD1P09007 STU2YLR045C 2667 nt3.57□□□□□ -1.84
SRD1P09007 YGL140CYGL140C 3660 nt3.56□□□□□ -1.84
SRD1P09007 SPE1YKL184W 1401 nt3.56□□□□□ -1.84
SRD1P09007 YCR081C-AYCR081C-A 237 nt3.56□□□□□ -1.84
SRD1P09007 YER087C-AYER087C-A 552 nt3.56□□□□□ -1.84
SRD1P09007 RPS23AYGR118W 438 nt3.56□□□□□ -1.84
SRD1P09007 COX23YHR116W 456 nt3.56□□□□□ -1.84
SRD1P09007 YLR302CYLR302C 363 nt3.56□□□□□ -1.84
SRD1P09007 CMC2YBL059C-A 330 nt3.56□□□□□ -1.84
SRD1P09007 VPS3YDR495C 3036 nt3.55□□□□□ -1.84
SRD1P09007 SIZ1YDR409W 2715 nt3.55□□□□□ -1.84
SRD1P09007 PSF1YDR013W 627 nt3.55□□□□□ -1.84
SRD1P09007 YHR138CYHR138C 345 nt3.55□□□□□ -1.84
SRD1P09007 MRPL38YKL170W 417 nt3.55□□□□□ -1.84
SRD1P09007 RMP1YLR145W 606 nt3.55□□□□□ -1.84
SRD1P09007 YAR047CYAR047C 321 nt3.55□□□□□ -1.84
SRD1P09007 HHT2YNL031C 411 nt3.55□□□□□ -1.84
SRD1P09007 HSP10YOR020C 321 nt3.55□□□□□ -1.84
SRD1P09007 RPN2YIL075C 2838 nt3.55□□□□□ -1.84
SRD1P09007 NMA111YNL123W 2994 nt3.54□□□□□ -1.84
SRD1P09007 DNM1YLL001W 2274 nt3.54□□□□□ -1.84
SRD1P09007 SMB1YER029C 591 nt3.54□□□□□ -1.84
SRD1P09007 YER038W-AYER038W-A 381 nt3.54□□□□□ -1.84
SRD1P09007 HEM4YOR278W 828 nt3.54□□□□□ -1.84
SRD1P09007 UTP13YLR222C 2454 nt3.54□□□□□ -1.84
SRD1P09007 YLR001CYLR001C 2589 nt3.54□□□□□ -1.84
SRD1P09007 SET1YHR119W 3243 nt3.53□□□□□ -1.84
SRD1P09007 AUS1YOR011W 4185 nt3.53□□□□□ -1.84
SRD1P09007 MGT1YDL200C 567 nt3.53□□□□□ -1.84
SRD1P09007 BET3YKR068C 582 nt3.53□□□□□ -1.84
SRD1P09007 YOL150CYOL150C 312 nt3.53□□□□□ -1.84
SRD1P09007 YPL034WYPL034W 498 nt3.53□□□□□ -1.84
SRD1P09007 YPL080CYPL080C 327 nt3.53□□□□□ -1.84
SRD1P09007 snR42snR42 351 nt3.53□□□□□ -1.84
SRD1P09007 NOP4YPL043W 2058 nt3.53□□□□□ -1.84
SRD1P09007 MYO3YKL129C 3819 nt3.53□□□□□ -1.84
SRD1P09007 FLO5YHR211W 3228 nt3.52□□□□□ -1.85
SRD1P09007 YDR034C-DYDR034C-D 5313 nt3.52□□□□□ -1.85
SRD1P09007 TCD1YHR003C 1290 nt3.52□□□□□ -1.85
SRD1P09007 TPM2YIL138C 486 nt3.52□□□□□ -1.85
SRD1P09007 IRC19YLL033W 693 nt3.52□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms