Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
THBS1P07996 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.02■□□□□ 0.64
THBS1P07996 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
THBS1P07996 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.02■□□□□ 0.64
THBS1P07996 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.02■□□□□ 0.64
THBS1P07996 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.02■□□□□ 0.64
THBS1P07996 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
THBS1P07996 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
THBS1P07996 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
THBS1P07996 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.02■□□□□ 0.63
THBS1P07996 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
THBS1P07996 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
THBS1P07996 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.02■□□□□ 0.63
THBS1P07996 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
THBS1P07996 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
THBS1P07996 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
THBS1P07996 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
THBS1P07996 AC073314.1-201ENST00000568729 2216 ntBASIC19.01■□□□□ 0.63
THBS1P07996 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
THBS1P07996 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
THBS1P07996 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.01■□□□□ 0.63
THBS1P07996 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
THBS1P07996 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
THBS1P07996 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
THBS1P07996 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
THBS1P07996 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
THBS1P07996 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.01■□□□□ 0.63
THBS1P07996 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
THBS1P07996 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.01■□□□□ 0.63
THBS1P07996 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
THBS1P07996 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
THBS1P07996 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
THBS1P07996 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.01■□□□□ 0.63
THBS1P07996 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
THBS1P07996 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.01■□□□□ 0.63
THBS1P07996 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
THBS1P07996 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
THBS1P07996 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 SLC7A5P2-201ENST00000553010 536 ntBASIC19■□□□□ 0.63
THBS1P07996 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19■□□□□ 0.63
THBS1P07996 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19■□□□□ 0.63
THBS1P07996 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
THBS1P07996 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
THBS1P07996 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
THBS1P07996 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
THBS1P07996 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
THBS1P07996 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.99■□□□□ 0.63
THBS1P07996 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
THBS1P07996 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.99■□□□□ 0.63
THBS1P07996 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.99■□□□□ 0.63
THBS1P07996 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.99■□□□□ 0.63
THBS1P07996 AC034268.1-201ENST00000441047 882 ntBASIC18.99■□□□□ 0.63
THBS1P07996 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.99■□□□□ 0.63
THBS1P07996 SLC7A5P1-201ENST00000568957 537 ntBASIC18.99■□□□□ 0.63
THBS1P07996 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
THBS1P07996 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
THBS1P07996 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
THBS1P07996 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
THBS1P07996 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
THBS1P07996 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
THBS1P07996 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
THBS1P07996 AC004854.2-201ENST00000608450 1441 ntBASIC18.99■□□□□ 0.63
THBS1P07996 FP700111.2-201ENST00000619190 1892 ntBASIC18.99■□□□□ 0.63
THBS1P07996 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
THBS1P07996 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
THBS1P07996 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
THBS1P07996 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
THBS1P07996 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
THBS1P07996 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
THBS1P07996 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.98■□□□□ 0.63
THBS1P07996 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.98■□□□□ 0.63
THBS1P07996 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
THBS1P07996 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
THBS1P07996 AC027702.1-201ENST00000563810 1770 ntBASIC18.98■□□□□ 0.63
THBS1P07996 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
THBS1P07996 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
THBS1P07996 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.98■□□□□ 0.63
THBS1P07996 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
THBS1P07996 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
THBS1P07996 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
THBS1P07996 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
THBS1P07996 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.97■□□□□ 0.63
THBS1P07996 AC073130.3-201ENST00000624389 2278 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms