Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RB1P06400 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC22.03■■□□□ 1.12
RB1P06400 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RB1P06400 AC120498.8-201ENST00000614275 531 ntBASIC22.03■■□□□ 1.12
RB1P06400 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RB1P06400 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RB1P06400 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RB1P06400 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RB1P06400 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RB1P06400 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RB1P06400 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RB1P06400 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RB1P06400 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
RB1P06400 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
RB1P06400 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
RB1P06400 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
RB1P06400 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RB1P06400 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.02■■□□□ 1.12
RB1P06400 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.02■■□□□ 1.12
RB1P06400 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RB1P06400 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.02■■□□□ 1.12
RB1P06400 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RB1P06400 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RB1P06400 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RB1P06400 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
RB1P06400 REXO2-216ENST00000544196 452 ntTSL 3 BASIC22.02■■□□□ 1.12
RB1P06400 MIR4785-201ENST00000585005 73 ntBASIC22.02■■□□□ 1.12
RB1P06400 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC22.02■■□□□ 1.12
RB1P06400 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RB1P06400 AC110285.5-201ENST00000611501 352 ntBASIC22.02■■□□□ 1.12
RB1P06400 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RB1P06400 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RB1P06400 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RB1P06400 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.02■■□□□ 1.12
RB1P06400 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
RB1P06400 AC116050.2-201ENST00000612102 1779 ntBASIC22.02■■□□□ 1.11
RB1P06400 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RB1P06400 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RB1P06400 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RB1P06400 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.01■■□□□ 1.11
RB1P06400 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC22.01■■□□□ 1.11
RB1P06400 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.01■■□□□ 1.11
RB1P06400 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC22.01■■□□□ 1.11
RB1P06400 KRT18P21-201ENST00000515767 1272 ntBASIC22.01■■□□□ 1.11
RB1P06400 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.01■■□□□ 1.11
RB1P06400 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC22.01■■□□□ 1.11
RB1P06400 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22.01■■□□□ 1.11
RB1P06400 AL023875.1-201ENST00000640777 796 ntBASIC22.01■■□□□ 1.11
RB1P06400 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RB1P06400 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
RB1P06400 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
RB1P06400 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RB1P06400 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
RB1P06400 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC22.01■■□□□ 1.11
RB1P06400 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
RB1P06400 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC22■■□□□ 1.11
RB1P06400 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RB1P06400 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RB1P06400 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22■■□□□ 1.11
RB1P06400 AC239809.2-201ENST00000415381 517 ntBASIC22■■□□□ 1.11
RB1P06400 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22■■□□□ 1.11
RB1P06400 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22■■□□□ 1.11
RB1P06400 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC22■■□□□ 1.11
RB1P06400 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22■■□□□ 1.11
RB1P06400 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RB1P06400 AC068473.5-201ENST00000616428 2072 ntBASIC22■■□□□ 1.11
RB1P06400 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC22■■□□□ 1.11
RB1P06400 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RB1P06400 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.99■■□□□ 1.11
RB1P06400 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
RB1P06400 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RB1P06400 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RB1P06400 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RB1P06400 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
RB1P06400 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RB1P06400 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.99■■□□□ 1.11
RB1P06400 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.99■■□□□ 1.11
RB1P06400 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RB1P06400 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.99■■□□□ 1.11
RB1P06400 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.99■■□□□ 1.11
RB1P06400 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RB1P06400 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.99■■□□□ 1.11
RB1P06400 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RB1P06400 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RB1P06400 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RB1P06400 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.98■■□□□ 1.11
RB1P06400 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
RB1P06400 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
RB1P06400 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
RB1P06400 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RB1P06400 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.98■■□□□ 1.11
RB1P06400 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.98■■□□□ 1.11
RB1P06400 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RB1P06400 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.98■■□□□ 1.11
RB1P06400 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.98■■□□□ 1.11
RB1P06400 AC005829.2-201ENST00000571422 1056 ntBASIC21.98■■□□□ 1.11
RB1P06400 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.98■■□□□ 1.11
RB1P06400 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.98■■□□□ 1.11
RB1P06400 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RB1P06400 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms