Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD74P04233 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
CD74P04233 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CD74P04233 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD74P04233 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD74P04233 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD74P04233 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD74P04233 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD74P04233 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.37■□□□□ 0.37
CD74P04233 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CD74P04233 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CD74P04233 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.36■□□□□ 0.37
CD74P04233 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.36■□□□□ 0.37
CD74P04233 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
CD74P04233 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CD74P04233 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CD74P04233 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 AC239859.2-201ENST00000444165 318 ntBASIC17.36■□□□□ 0.37
CD74P04233 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.36■□□□□ 0.37
CD74P04233 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.36■□□□□ 0.37
CD74P04233 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.36■□□□□ 0.37
CD74P04233 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CD74P04233 AC098818.2-201ENST00000564925 2320 ntBASIC17.36■□□□□ 0.37
CD74P04233 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CD74P04233 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD74P04233 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD74P04233 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CD74P04233 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.35■□□□□ 0.37
CD74P04233 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD74P04233 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CD74P04233 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD74P04233 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.35■□□□□ 0.37
CD74P04233 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.35■□□□□ 0.37
CD74P04233 AC092171.4-201ENST00000609130 632 ntBASIC17.35■□□□□ 0.37
CD74P04233 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD74P04233 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CD74P04233 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
CD74P04233 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD74P04233 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CD74P04233 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD74P04233 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CD74P04233 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.35■□□□□ 0.37
CD74P04233 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD74P04233 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.34■□□□□ 0.37
CD74P04233 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CD74P04233 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD74P04233 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.34■□□□□ 0.37
CD74P04233 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD74P04233 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.34■□□□□ 0.37
CD74P04233 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.34■□□□□ 0.37
CD74P04233 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.34■□□□□ 0.37
CD74P04233 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD74P04233 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.34■□□□□ 0.37
CD74P04233 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.34■□□□□ 0.37
CD74P04233 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.34■□□□□ 0.37
CD74P04233 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC17.34■□□□□ 0.37
CD74P04233 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
CD74P04233 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD74P04233 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD74P04233 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC17.34■□□□□ 0.37
CD74P04233 AC092720.2-201ENST00000602388 1665 ntBASIC17.34■□□□□ 0.37
CD74P04233 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CD74P04233 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.34■□□□□ 0.37
CD74P04233 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC17.34■□□□□ 0.37
CD74P04233 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD74P04233 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD74P04233 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CD74P04233 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
CD74P04233 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
CD74P04233 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD74P04233 AC125437.2-201ENST00000625180 2167 ntBASIC17.33■□□□□ 0.37
CD74P04233 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CD74P04233 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD74P04233 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD74P04233 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CD74P04233 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD74P04233 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD74P04233 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD74P04233 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.33■□□□□ 0.36
CD74P04233 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC17.33■□□□□ 0.36
CD74P04233 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.33■□□□□ 0.36
CD74P04233 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
CD74P04233 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD74P04233 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CD74P04233 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17.33■□□□□ 0.36
CD74P04233 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CD74P04233 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.33■□□□□ 0.36
CD74P04233 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms