Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.46■□□□□ 0.71
MT-ND1P03886 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
MT-ND1P03886 AL136116.3-201ENST00000402907 1138 ntBASIC19.46■□□□□ 0.71
MT-ND1P03886 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.46■□□□□ 0.71
MT-ND1P03886 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
MT-ND1P03886 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND1P03886 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND1P03886 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MT-ND1P03886 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MT-ND1P03886 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.45■□□□□ 0.7
MT-ND1P03886 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND1P03886 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND1P03886 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND1P03886 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MT-ND1P03886 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND1P03886 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
MT-ND1P03886 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MT-ND1P03886 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND1P03886 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.45■□□□□ 0.7
MT-ND1P03886 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
MT-ND1P03886 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.45■□□□□ 0.7
MT-ND1P03886 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND1P03886 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.45■□□□□ 0.7
MT-ND1P03886 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MT-ND1P03886 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND1P03886 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND1P03886 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
MT-ND1P03886 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MT-ND1P03886 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND1P03886 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.44■□□□□ 0.7
MT-ND1P03886 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.44■□□□□ 0.7
MT-ND1P03886 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND1P03886 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND1P03886 FP700111.2-201ENST00000619190 1892 ntBASIC19.44■□□□□ 0.7
MT-ND1P03886 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MT-ND1P03886 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND1P03886 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND1P03886 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.44■□□□□ 0.7
MT-ND1P03886 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND1P03886 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.44■□□□□ 0.7
MT-ND1P03886 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND1P03886 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.44■□□□□ 0.7
MT-ND1P03886 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND1P03886 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MT-ND1P03886 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND1P03886 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MT-ND1P03886 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.44■□□□□ 0.7
MT-ND1P03886 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
MT-ND1P03886 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND1P03886 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND1P03886 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND1P03886 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.43■□□□□ 0.7
MT-ND1P03886 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND1P03886 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
MT-ND1P03886 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.43■□□□□ 0.7
MT-ND1P03886 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.43■□□□□ 0.7
MT-ND1P03886 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.43■□□□□ 0.7
MT-ND1P03886 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MT-ND1P03886 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND1P03886 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MT-ND1P03886 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.42■□□□□ 0.7
MT-ND1P03886 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.42■□□□□ 0.7
MT-ND1P03886 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
MT-ND1P03886 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MT-ND1P03886 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.42■□□□□ 0.7
MT-ND1P03886 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.42■□□□□ 0.7
MT-ND1P03886 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.42■□□□□ 0.7
MT-ND1P03886 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MT-ND1P03886 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.41■□□□□ 0.7
MT-ND1P03886 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.41■□□□□ 0.7
MT-ND1P03886 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.41■□□□□ 0.7
MT-ND1P03886 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MT-ND1P03886 AC099778.1-201ENST00000568593 1911 ntBASIC19.41■□□□□ 0.7
MT-ND1P03886 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.41■□□□□ 0.7
MT-ND1P03886 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.41■□□□□ 0.7
MT-ND1P03886 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MT-ND1P03886 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.41■□□□□ 0.7
MT-ND1P03886 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.41■□□□□ 0.7
MT-ND1P03886 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
MT-ND1P03886 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms