Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRIM3O75382 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM3O75382 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRIM3O75382 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM3O75382 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM3O75382 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM3O75382 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM3O75382 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.22■□□□□ 0.67
TRIM3O75382 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRIM3O75382 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TRIM3O75382 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM3O75382 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM3O75382 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
TRIM3O75382 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.22■□□□□ 0.67
TRIM3O75382 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TRIM3O75382 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM3O75382 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM3O75382 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM3O75382 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM3O75382 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM3O75382 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM3O75382 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM3O75382 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM3O75382 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM3O75382 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM3O75382 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM3O75382 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM3O75382 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM3O75382 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.21■□□□□ 0.67
TRIM3O75382 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM3O75382 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM3O75382 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM3O75382 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIM3O75382 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM3O75382 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
TRIM3O75382 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM3O75382 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM3O75382 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM3O75382 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM3O75382 AC026185.1-201ENST00000445748 174 ntBASIC19.2■□□□□ 0.66
TRIM3O75382 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM3O75382 DUX4L16-201ENST00000555130 1264 ntBASIC19.2■□□□□ 0.66
TRIM3O75382 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM3O75382 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM3O75382 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM3O75382 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM3O75382 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
TRIM3O75382 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRIM3O75382 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM3O75382 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM3O75382 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM3O75382 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRIM3O75382 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM3O75382 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM3O75382 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM3O75382 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM3O75382 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM3O75382 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.19■□□□□ 0.66
TRIM3O75382 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TRIM3O75382 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRIM3O75382 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.19■□□□□ 0.66
TRIM3O75382 AC120498.10-201ENST00000621827 505 ntBASIC19.19■□□□□ 0.66
TRIM3O75382 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM3O75382 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM3O75382 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM3O75382 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM3O75382 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM3O75382 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRIM3O75382 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM3O75382 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM3O75382 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRIM3O75382 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRIM3O75382 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM3O75382 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM3O75382 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM3O75382 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM3O75382 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM3O75382 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM3O75382 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM3O75382 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM3O75382 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.18■□□□□ 0.66
TRIM3O75382 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
TRIM3O75382 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.18■□□□□ 0.66
TRIM3O75382 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
TRIM3O75382 AC010536.3-201ENST00000620306 533 ntBASIC19.18■□□□□ 0.66
TRIM3O75382 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM3O75382 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM3O75382 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.18■□□□□ 0.66
TRIM3O75382 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM3O75382 AC061975.6-201ENST00000579045 1553 ntBASIC19.18■□□□□ 0.66
TRIM3O75382 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRIM3O75382 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRIM3O75382 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM3O75382 KRT16P2-201ENST00000414673 1423 ntBASIC19.17■□□□□ 0.66
TRIM3O75382 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM3O75382 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM3O75382 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM3O75382 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.17■□□□□ 0.66
TRIM3O75382 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRIM3O75382 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms